Publication Passport
Proc Natl Acad Sci U S A 107(26), 11889-11894, 2010

overview

title	Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus)
authors	Stajich JE, Wilke SK, Ahren D, Au CH, Birren BW, Borodovsky M, Burns C, Canback B, Casselton LA, Cheng CK, Deng J, Dietrich FS, Fargo DC, Farman ML, Gathman AC, Goldberg J, Guigo R, Hoegger PJ, Hooker JB, Huggins A, James TY, Kamada T, Kilaru S, Kodira C, Kues U, Kupfer D, Kwan HS, Lomsadze A, Li W, Lilly WW, Ma LJ, Mackey AJ, Manning G, Martin F, Muraguchi H, Natvig DO, Palmerini H, Ramesh MA, Rehmeyer CJ, Roe BA, Shenoy N, Stanke M, Ter-Hovhannisyan V, Tunlid A, Velagapudi R, Vision TJ, Zeng Q, Zolan ME, Pukkila PJ
journal	Proc Natl Acad Sci U S A
volume	107
issue	26
pages	11889-11894
year	2010
links	DOI, PubMed

sequences

6,226 items found, displaying 1 to 25.[First/Prev] 1, 2, 3, 4, 5, 6, 7, 8 [Next/Last]

accession#	description	strainnumber	date	length
DR908026	CCSEN06H05 Coprinus cinereus senescent mycelia cDNAs Coprinopsis cinerea cDNA similar to RS17_NEUCR 40S ribosomal protein S17 (CRP3) [Aspergillus nidulans FGSC A4], gi\|40738538\|gb\|EAA57728.1\|, Expect= 2e-49, mRNA sequence	FGSC A4	2005/08/02	490
DR907880	CCSEN04F08 Coprinus cinereus senescent mycelia cDNAs Coprinopsis cinerea cDNA similar to putative oxidoreductase, oxygen dependent, FAD-dependent protein [Vibrio parahaemolyticus RIMD 2210633], gi\|28900490\|ref\|NP_800145.1\|, Expect= 1e-20, mRNA sequence	RIMD 2210633	2005/08/02	1019
DR907879	CCSEN04E08 Coprinus cinereus senescent mycelia cDNAs Coprinopsis cinerea cDNA similar to RS17_NEUCR 40S ribosomal protein S17 (CRP3) [Aspergillus nidulans FGSC A4], gi\|40738538\|gb\|EAA57728.1\|, Expect= 3e-49, mRNA sequence	FGSC A4	2005/08/02	577
DR907808	CCSEN03H10 Coprinus cinereus senescent mycelia cDNAs Coprinopsis cinerea cDNA similar to ERF1_PODAN Eukaryotic peptide chain release factor subunit 1 (eRF1) (Eukaryotic release factor 1) [Aspergillus nidulans FGSC A4], gi\|40740951\|gb\|EAA60141.1\|, Expect= 2e-53, mRNA sequence	FGSC A4	2005/08/02	942
DR907788	CCSEN03C08 Coprinus cinereus senescent mycelia cDNAs Coprinopsis cinerea cDNA similar to AER335Wp [Ashbya gossypii ATCC 10895], gi\|44984005\|gb\|AAS53015.1\|, Expect= 7e-14, mRNA sequence	ATCC 10895	2005/08/02	799
DR907775	CCSEN03E06 Coprinus cinereus senescent mycelia cDNAs Coprinopsis cinerea cDNA similar to COG0666: FOG: Ankyrin repeat [Anabaena variabilis ATCC 29413], gi\|53764852\|ref\|ZP_00160937.2\|, Expect= 2e-20, mRNA sequence	ATCC 29413	2005/08/02	849
DR907624	CCSEN01D09 Coprinus cinereus senescent mycelia cDNAs Coprinopsis cinerea cDNA similar to ABR116Cp [Ashbya gossypii ATCC 10895], gi\|44981035\|gb\|AAS50887.1\|, Expect= 2e-26, mRNA sequence	ATCC 10895	2005/08/02	724
DR775494	CCFBM9D10.rev Coprinus cinereus fruit body cap cDNAs in early meiotic prophase (K-1 to K+1) Coprinopsis cinerea cDNA similar to AFR050Wp [Ashbya gossypii ATCC 10895], gi\|44984519\|gb\|AAS53421.1\|, Expect= 7e-42, mRNA sequence	ATCC 10895	2005/07/28	677
DR775472	CCFBM9F07 Coprinus cinereus fruit body cap cDNAs in early meiotic prophase (K-1 to K+1) Coprinopsis cinerea cDNA similar to ACR118Wp [Ashbya gossypii ATCC 10895], gi\|44981559\|gb\|AAS51344.1\|, Expect= 4e-17, mRNA sequence	ATCC 10895	2005/07/28	531
DR775384	CCFBM8E08 Coprinus cinereus fruit body cap cDNAs in early meiotic prophase (K-1 to K+1) Coprinopsis cinerea cDNA similar to ADR208Wp [Ashbya gossypii ATCC 10895], gi\|44982898\|gb\|AAS52128.1\|, Expect= 1e-71, mRNA sequence	ATCC 10895	2005/07/28	621
DR775196	CCFBM6E08 Coprinus cinereus fruit body cap cDNAs in early meiotic prophase (K-1 to K+1) Coprinopsis cinerea cDNA similar to AER359Wp [Ashbya gossypii ATCC 10895], gi\|44984029\|gb\|AAS53039.1\|, Expect= 2e-62, mRNA sequence	ATCC 10895	2005/07/28	742
DR775111	CCFBM5G09 Coprinus cinereus fruit body cap cDNAs in early meiotic prophase (K-1 to K+1) Coprinopsis cinerea cDNA similar to AFR012Cp [Ashbya gossypii ATCC 10895], gi\|44984481\|gb\|AAS53383.1\|, Expect= 8e-32, mRNA sequence	ATCC 10895	2005/07/28	678
DR774913	CCFBM3F08 Coprinus cinereus fruit body cap cDNAs in early meiotic prophase (K-1 to K+1) Coprinopsis cinerea cDNA similar to ABR042Wp [Ashbya gossypii ATCC 10895], gi\|44980929\|gb\|AAS50812.1\|, Expect= 6e-33, mRNA sequence	ATCC 10895	2005/07/28	812
DR774672	CCFBM1E01 Coprinus cinereus fruit body cap cDNAs in early meiotic prophase (K-1 to K+1) Coprinopsis cinerea cDNA similar to ADR206Wp [Ashbya gossypii ATCC 10895], gi\|44982896\|gb\|AAS52126.1\|, Expect= 9e-82, mRNA sequence	ATCC 10895	2005/07/28	678
DR753838	CCRAP7F12 Coprinus cinereus rapamycin-treated mycelia cDNAs Coprinopsis cinerea cDNA similar to ADL212Wp [Ashbya gossypii ATCC 10895], gi\|44982422\|gb\|AAS51708.1\|, Expect= 3e-16, mRNA sequence	ATCC 10895	2005/07/26	627
DR753835	CCRAP7C12 Coprinus cinereus rapamycin-treated mycelia cDNAs Coprinopsis cinerea cDNA similar to AER424Cp [Ashbya gossypii ATCC 10895], gi\|44984093\|gb\|AAS53103.1\|, Expect= 5e-11, mRNA sequence	ATCC 10895	2005/07/26	768
DR753804	CCRAP7D08 Coprinus cinereus rapamycin-treated mycelia cDNAs Coprinopsis cinerea cDNA similar to COG0251: Putative translation initiation inhibitor, yjgF family [Clostridium thermocellum ATCC 27405], gi\|48859893\|ref\|ZP_00313822.1\|, Expect= 2e-14, mRNA sequence	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2005/07/26	792
DR753787	CCRAP7C06 Coprinus cinereus rapamycin-treated mycelia cDNAs Coprinopsis cinerea cDNA similar to MET3_EMENI Sulfate adenylyltransferase (Sulfate adenylate transferase) (SAT) (ATP-sulfurylase) [Aspergillus nidulans FGSC A4], gi\|40741621\|gb\|EAA60811.1\|, Expect= 9e-35, mRNA sequence	FGSC A4	2005/07/26	372
DR753752	CCRAP7H01 Coprinus cinereus rapamycin-treated mycelia cDNAs Coprinopsis cinerea cDNA similar to AGL140Cp [Ashbya gossypii ATCC 10895], gi\|44985727\|gb\|AAS54351.1\|, Expect= 1e-10, mRNA sequence	ATCC 10895	2005/07/26	578
DR753704	CCRAP6H07 Coprinus cinereus rapamycin-treated mycelia cDNAs Coprinopsis cinerea cDNA similar to ABR211Cp [Ashbya gossypii ATCC 10895], gi\|44981132\|gb\|AAS50984.1\|, Expect= 2e-17, mRNA sequence	ATCC 10895	2005/07/26	623
DR753683	CCRAP6C05 Coprinus cinereus rapamycin-treated mycelia cDNAs Coprinopsis cinerea cDNA similar to GLP_154_63949_61718 [Giardia lamblia ATCC 50803], gi\|29249344\|gb\|EAA40858.1\|, Expect= 6e-16, mRNA sequence	ATCC 50803	2005/07/26	675
DR753650	CCRAP6B01 Coprinus cinereus rapamycin-treated mycelia cDNAs Coprinopsis cinerea cDNA similar to AEL020Wp [Ashbya gossypii ATCC 10895], gi\|44983529\|gb\|AAS52665.1\|, Expect= 2e-36, mRNA sequence	ATCC 10895	2005/07/26	924
DR753455	CCRAP3G12 Coprinus cinereus rapamycin-treated mycelia cDNAs Coprinopsis cinerea cDNA similar to AGR022Cp [Ashbya gossypii ATCC 10895], gi\|44985900\|gb\|AAS54511.1\|, Expect= 5e-55, mRNA sequence	ATCC 10895	2005/07/26	837
DR753401	CCRAP3A06 Coprinus cinereus rapamycin-treated mycelia cDNAs Coprinopsis cinerea cDNA similar to AEL325Wp [Ashbya gossypii ATCC 10895], gi\|44983177\|gb\|AAS52359.1\|, Expect= 6e-66, mRNA sequence	ATCC 10895	2005/07/26	658
DR753350	CCRAP2F11 Coprinus cinereus rapamycin-treated mycelia cDNAs Coprinopsis cinerea cDNA similar to YlLYS5 [Yarrowia lipolytica CLIB99], gi\|49646797\|emb\|CAG83182.1\|, Expect= 3e-51, mRNA sequence	CLIB 99	2005/07/26	801

6,226 items found, displaying 1 to 25.[First/Prev] 1, 2, 3, 4, 5, 6, 7, 8 [Next/Last]

strains

11 items found, displaying 1 to 10.[First/Prev] 1, 2 [Next/Last]


species names Anabaena flos-aquae , Anabaena sp. , *Anabaena variabilis* , Nostoc sp. strain numbers 105 , ACMM 485 , ATCC 29413 , CALU 787 , CCALA 007 , CCAP 1403/13A , CCMEE 380 , DCC D0669 , IAM M-204 , IRRI Ab 51 XX , IU 1444 , IUCC 1444 , MSU A-37 , NIES-2095 , PCC 7937 , PCC 7937 Nostoc sp. , PPMSU 62 , UTCC 67 , UTCC B105 , UTEX 1444 , UTEX B 1444
species names Ashbya gosspii , Ashbya gossypii , *Eremothecium gossypii* strain numbers ATCC 10895 , CBS 109.51 , CDBB 161 , FGSC 9923 , IFO 1355 , MUCL 29450 , MULC 29450 , NBRC 1355 , NRRL Y-1056 , VKM F-3296 , VTT D-071264
species names *Bradyrhizobium japonicum* , Rhizobium sp. strain numbers 3I1B110 , ACCC 15034 , BCRC 13528 , CCRC 13528 , CCT 4249 , IAM 13628 , IFO 14792 , JCM 10833 , NBRC 14792 , NIFTAL 102 , NRRL B-4361 , NRRL B-4450 , R-12974 , USDA 110
species name *Clostridium thermocellum* type strain of *Clostridium thermocellum* strain numbers 157 T 157 is type strain of: Clostridium thermocellum , ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum , BCRC 14411 T BCRC 14411 is type strain of: Clostridium thermocellum , CCRC 14411 T CCRC 14411 is type strain of: Clostridium thermocellum , CCTM La 2956 T CCTM La 2956 is type strain of: Clostridium thermocellum , CECT 593 T CECT 593 is type strain of: Clostridium thermocellum , DSM 1237 T DSM 1237 is type strain of: Clostridium thermocellum , DSMZ 1237 T DSMZ 1237 is type strain of: Clostridium thermocellum , IAM 13660 T IAM 13660 is type strain of: Clostridium thermocellum , JCM 12338 T JCM 12338 is type strain of: Clostridium thermocellum , JCM 9322 T JCM 9322 is type strain of: Clostridium thermocellum , KCTC 1672 T KCTC 1672 is type strain of: Clostridium thermocellum , LMG 10435 T LMG 10435 is type strain of: Clostridium thermocellum , NBRC 103400 T NBRC 103400 is type strain of: Clostridium thermocellum , NCIB 10682 T NCIB 10682 is type strain of: Clostridium thermocellum , NCIMB 10682 T NCIMB 10682 is type strain of: Clostridium thermocellum , NRRL B-4536 T NRRL B-4536 is type strain of: Clostridium thermocellum , VPI 7372 T VPI 7372 is type strain of: Clostridium thermocellum , VTT E-81137 T VTT E-81137 is type strain of: Clostridium thermocellum
species names *Aspergillus nidulans* , Emericella nidulans , Emericella nidulans var. nidulans strain numbers ATCC 12996 , ATCC 26451 , ATCC 38163 , biA-1 , C. Thom 5616.1 , CBS 112.46 , FGSC A4 , G00 , Glasgow wild-type, Pontecorvo strain , IMI 038576ii , M139 , NRRL 194 , SRRC 273 , Thom 5616.1 , WB 194 , Yuill A69
species name *Giardia intestinalis* strain numbers ATCC 50803 , WB clone C6
species names Gloeobacter sp. , *Gloeobacter violaceus* strain numbers ACMM 428 , ATCC 29082 , DCC D0637 , PCC 7421 , SAG 7.82
species names *Saccharomyces bayanus* , Saccharomyces uvarum strain numbers 58I-2B , ATCC 90739 , CLIB 99
species names *Synechococcus leopoliensis* , Synechococcus sp. strain numbers 27344 , ATCC 27144 , CCALA 188 , CCAO 188 , CCAP 1405/1 , CCMEE 334 , DCC D0033 , IAM M-6 , IUCC 625 phage host , NIBB 1018 , PCC 6301 , PCC 6301 S. (cluster 1) elongatus , PPMSU 64 , SAG 1402-1 , SAG B 1402-1 , SAUG 1402/1 , Tx20 , UTCC 102 , UTEX 1550 , UTEX 625
species name *Thiobacillus denitrificans* strain numbers ATCC 25259 , T1

11 items found, displaying 1 to 10.[First/Prev] 1, 2 [Next/Last]

Publication Passport Proc Natl Acad Sci U S A 107(26), 11889-11894, 2010

Publication Passport
Proc Natl Acad Sci U S A 107(26), 11889-11894, 2010