Strain Passport
DSM 30083 Escherichia coli

overview

species name

all known species names for this strain
*Escherichia coli*

type strain of

Escherichia coli

strain numbers

ACM 1803

AJ 2617

ATCC 11775

BCRC 10675

BTCC U5/41

CAPM 6101

CCM 5172

CCRC 10675

CCT 0547

CCT 1357

CCTM 2067

CCTM La 2067

CCUG 24

CCUG 29300

CDBB 964

CECT 515

CGMCC 1.2389

CGMCC 1.2993

CIP 54.8

CIP 54.8T^T

CN 4382

CNCTC 6859

CNCTC Eck 206/59

CNCTC Eck 58/59

DSM 30083

DSMZ 30083

ELI 50

F. Oerskov

FIRDI 675

GISK 240001

IAM 12119

ICMP 15663

JCM 1649

K. Lincoln

Kauffmann U5/41

KCTC 2441

LMD 54.8

LMG 2092

LRA 73.08.009

NBIMCC 3398

NBRC 102203

NCAIM B.01874

NCCB 54008

NCDO 1989

NCFB 1989

NCIB 11943

NCIMB 11943

NCTC 9001

NCTC 9001 U5/41^T

NCTC 9001.^T

NZRM 3309

PCM 172

PCM 321

R. Sakazaki

SSIC U 5/41

strain U 5/41

U 5-41

U5/41

USCC 2054

USCC 2520

VTT E-94564

WDCM 90

Y. Kosako 82039

availability map

BRC strain browser

history

This Histri was manually curated (last saved on 2008-08-21).

Histri

sequences

38 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

accession#	description	strainnumber	date	length
HQ012019	Escherichia coli strain DSM 30083 16S ribosomal RNA gene, partial sequence	DSM 30083 T DSM 30083 is type strain of: Escherichia coli	2011/08/10	936
HV223972	JP 2003511015-A/974: HIGHLY CONSERVED GENES AND THEIR USE TO GENERATE SPECIES-SPECIFIC, GENUS-SPECIFIC, FAMILY-SPECIFIC, GROUP-SPECIFIC AND UNIVERSAL NUCLEIC ACID PROBES AND AMPLIFICATION PRIMERS TO RAPIDLY DETECT AND IDENTIFY ALGAL, ARCHAEAL, BACTERIAL, FUNGAL AND PARASITICAL MICROOR-GANISMS FROM CLINICAL SPECIMENS FOR DIAGNOSIS	DSM 30083 T DSM 30083 is type strain of: Escherichia coli	2011/07/15	804
HV223942	JP 2003511015-A/944: HIGHLY CONSERVED GENES AND THEIR USE TO GENERATE SPECIES-SPECIFIC, GENUS-SPECIFIC, FAMILY-SPECIFIC, GROUP-SPECIFIC AND UNIVERSAL NUCLEIC ACID PROBES AND AMPLIFICATION PRIMERS TO RAPIDLY DETECT AND IDENTIFY ALGAL, ARCHAEAL, BACTERIAL, FUNGAL AND PARASITICAL MICROOR-GANISMS FROM CLINICAL SPECIMENS FOR DIAGNOSIS	DSM 30083 T DSM 30083 is type strain of: Escherichia coli	2011/07/15	798
FN297863	Escherichia coli partial lacZ gene, strain CECT 515	CECT 515 T CECT 515 is type strain of: Escherichia coli	2010/04/01	496
GU134324	Escherichia coli strain ATCC 11775 MutL-like (mutL) gene, complete sequence	ATCC 11775 T ATCC 11775 is type strain of: Escherichia coli	2009/11/29	2310
GU134308	Escherichia coli strain ATCC 11775 TalA (talA) gene, complete cds	ATCC 11775 T ATCC 11775 is type strain of: Escherichia coli	2009/11/29	3949
GU134340	Escherichia coli strain ATCC 11775 AtpI (atpI) gene, complete cds	ATCC 11775 T ATCC 11775 is type strain of: Escherichia coli	2009/11/25	489
GU134332	Escherichia coli strain ATCC 11775 EutS (eutS) gene, complete cds	ATCC 11775 T ATCC 11775 is type strain of: Escherichia coli	2009/11/25	423
GU134316	Escherichia coli strain ATCC 11775 PtsG (ptsG) gene, complete cds	ATCC 11775 T ATCC 11775 is type strain of: Escherichia coli	2009/11/25	1705
GU134300	Escherichia coli strain ATCC 11775 XylAB (xylAB) gene, partial cds	ATCC 11775 T ATCC 11775 is type strain of: Escherichia coli	2009/11/25	2583
GU134292	Escherichia coli strain ATCC 11775 YeiG (yeiG) gene, complete cds	ATCC 11775 T ATCC 11775 is type strain of: Escherichia coli	2009/11/25	914
EU014689	Escherichia coli strain KCTC 2441 16S ribosomal RNA gene, partial sequence	KCTC 2441 T KCTC 2441 is type strain of: Escherichia coli	2007/09/11	1541
EU014679	Escherichia coli strain KCTC 2441 PutP (putP) gene, partial cds	KCTC 2441 T KCTC 2441 is type strain of: Escherichia coli	2007/09/11	1858
EU014669	Escherichia coli strain KCTC 2441 Mdh (mdh) gene, partial cds	KCTC 2441 T KCTC 2441 is type strain of: Escherichia coli	2007/09/11	826
EU014658	Escherichia coli strain KCTC 2441 ManB (manB) gene, partial cds	KCTC 2441 T KCTC 2441 is type strain of: Escherichia coli	2007/09/11	769
EU014649	Escherichia coli strain KCTC 2441 GyrB (gyrB) gene, partial cds	KCTC 2441 T KCTC 2441 is type strain of: Escherichia coli	2007/09/11	1169
EU014639	Escherichia coli strain KCTC 2441 GapA (gapA) gene, partial cds	KCTC 2441 T KCTC 2441 is type strain of: Escherichia coli	2007/09/11	904
EU010107	Escherichia coli strain CIP 54.8 RNA polymerase beta subunit (rpoB) gene, partial cds	CIP 54.8 T CIP 54.8 is type strain of: Escherichia coli	2007/07/26	501
EU010080	Escherichia coli strain CIP 54.8 CTP synthetase (pyrG) gene, partial cds	CIP 54.8 T CIP 54.8 is type strain of: Escherichia coli	2007/07/26	306
EU010053	Escherichia coli strain CIP 54.8 leucine tRNA synthetase (leuS) gene, partial cds	CIP 54.8 T CIP 54.8 is type strain of: Escherichia coli	2007/07/26	642
EU010026	Escherichia coli strain CIP 54.8 elongation factor EF-G (fusA) gene, partial cds	CIP 54.8 T CIP 54.8 is type strain of: Escherichia coli	2007/07/26	633
EF445891	Escherichia coli strain ATCC 11775 tna operon, complete sequence	ATCC 11775 T ATCC 11775 is type strain of: Escherichia coli	2007/03/21	3050
AB242925	Escherichia coli rpoD gene for RNA polymerase sigma-subunit, complete cds, strain: JCM1649	JCM 1649 T JCM 1649 is type strain of: Escherichia coli	2007/01/31	679
AB242918	Escherichia coli gyrB gene for gyrase B, complete cds, strain: JCM1649	JCM 1649 T JCM 1649 is type strain of: Escherichia coli	2007/01/31	999
AB242910	Escherichia coli gene for 16S ribosomal RNA, partial sequence, strain: JCM1649	JCM 1649 T JCM 1649 is type strain of: Escherichia coli	2007/01/31	1110

38 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

publications

38 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]


Martin MC, Martinez N, del Rio B, Ladero V, Fernandez M, Alvarez MA A novel real-time polymerase chain reaction-based method for the detection and quantification of lactose-fermenting Enterobacteriaceae in the dairy and other food industries J Dairy Sci 93(3), 860-867, 2010
Chang HW, Nam YD, Jung MY, Kim KH, Roh SW, Kim MS, Jeon CO, Yoon JH, Bae JW Statistical superiority of genome-probing microarrays as genomic DNA-DNA hybridization in revealing the bacterial phylogenetic relationship compared to conventional methods J Microbiol Methods 75(3), 523-530, 2008
Salerno A, Deletoile A, Lefevre M, Ciznar I, Krovacek K, Grimont P, Brisse S Recombining population structure of Plesiomonas shigelloides (Enterobacteriaceae) revealed by multilocus sequence typing J Bacteriol 189(21), 7808-7818, 2007
Bernasconi C, Volponi G, Picozzi C, Foschino R Use of the tna operon as a new molecular target for Escherichia coli detection Appl Environ Microbiol 73(19), 6321-6325, 2007
Matsuura T, Shinohara H, Inoue Y, Azegami K, Tsushima S, Tsukamoto T, Mizuno A Erwinia isolates from the bacterial shoot blight of pear in Japan are closely related to Erwinia pyrifoliae based on phylogenetic analyses of gyrB and rpoD genes J Gen Plant Pathol 73, 53-58, 2007
Young JM, Park DC Relationships of plant pathogenic enterobacteria based on partial atpD, carA, and recA as individual and concatenated nucleotide and peptide sequences Syst Appl Microbiol 30(5), 343-354, 2007
Escherichia coli in Water by Membrane Filtration Using Modified membrane-Thermotolerant Escherichia coli Agar.Washington, DC: Environmental Protection Agency (journal unknown) , EPA EPA Method 1603, 2005
Enterococci in Water by Membrane Filtration Using membrane-Enterococcus Indoxyl-B-D-Glucoside Agar.Washington, DC: Environmental Protection Agency (journal unknown) , EPA EPA Method 1600, 2005
Fecal Coliforms in Sewage Sludge (Biosolids) by Multiple-Tube Fermenation using Lauryl Tryptose Broth (LTB) and EC Medium.Washington, DC: Environmental Protection Agency (journal unknown) , EPA EPA Method 1680, 2005
Escherichia coli in Water by Membrane Filtration using membrane-Thermotolerant Escherichia coli Agar (mTEC).Washington, DC: Environmental Protection Agency (journal unknown) , EPA EPA Method 1103.1, 2005
Enterococci in Water by Membrane Filtration Using membrane-Enterococcus-Esculin Iron Agar.Washington, DC: Environmental Protection Agency (journal unknown) , EPA EPA Method 1106.1, 2005
Mitterer G, Huber M, Leidinger E, Kirisits C, Lubitz W, Mueller MW, Schmidt WM Microarray-based identification of bacteria in clinical samples by solid-phase PCR amplification of 23S ribosomal DNA sequences J Clin Microbiol 42(3), 1048-1057, 2004
Huys G, Cnockaert M, Janda JM, Swings J Escherichia albertii sp. nov., a diarrhoeagenic species isolated from stool specimens of Bangladeshi children Int J Syst Evol Microbiol 53(3), 807-810, 2003
Wang L, Rothemund D, Curd H, Reeves PR Species-wide variation in the Escherichia coli flagellin (H-antigen) gene J Bacteriol 185(9), 2936-2943, 2003
Willems A, Fernandez-Lopez M, Munoz-Adelantado E, Goris J, De Vos P, Martinez-Romero E, Toro N, Gillis M Description of new Ensifer strains from nodules and proposal to transfer Ensifer adhaerens Casida 1982 to Sinorhizobium as Sinorhizobium adhaerens comb. nov. Request for an Opinion Int J Syst Evol Microbiol 53(4), 1207-1217, 2003
Microbiology of food and animal feeding stuffs--Guidelines on preparation and production of culture media-- Part 2: Practical guidelines on performance testing of culture media..Geneva (Switzerland): International Organization for Standardization/ANSI (journal unknown) , ISO ISO 11133-2, 2003
Fukushima M, Kakinuma K, Kawaguchi R Phylogenetic analysis of Salmonella, Shigella, and Escherichia coli strains on the basis of the gyrB gene sequence J Clin Microbiol 40(8), 2779-2785, 2002
Food Microbiology. Methods2.12: Examination for specific organisms--Escherichia coli in bivalve molluscs--Rapid method.Sydney, NSW, Australia: Standards Australia (journal unknown) , Standards Australia AS/NZS 1766.2.12, 2002
Fuchs BM, Syutsubo K, Ludwig W, Amann R In situ accessibility of Escherichia coli 23S rRNA to fluorescently labeled oligonucleotide probes Appl Environ Microbiol 67(2), 961-968, 2001
Water microbiology. Method 19: Examination for thermophilic Campylobacter spp. --Membrane filtration.Sydney, NSW, Australia: Standards Australia (journal unknown) , Standards Australia AS/NZS 4276.19, 2001
Farnleitner AH, Kreuzinger N, Kavka GG, Grillenberger S, Rath J, Mach RL Simultaneous detection and differentiation of Escherichia coli populations from environmental freshwaters by means of sequence variations in a fragment of the beta-D-glucuronidase gene Appl Environ Microbiol 66(4), 1340-1346, 2000
Water microbiology. Method 16: Bactericidal efficiency of water disinfecting tablets.Sydney, NSW, Australia: Standards Australia (journal unknown) , Standards Australia AS/NZS 4276.16, 1999
Weigel LM, Steward CD, Tenover FC gyrA mutations associated with fluoroquinolone resistance in eight species of Enterobacteriaceae Antimicrob Agents Chemother 42(10), 2661-2667, 1998
Lange JL, Thorne PS, Lynch N Application of flow cytometry and fluorescent in situ hybridization for assessment of exposures to airborne bacteria Appl Environ Microbiol 63(4), 1557-1563, 1997
Cilia V, Lafay B, Christen R Sequence heterogeneities among 16S ribosomal RNA sequences, and their effect on phylogenetic analyses at the species level Mol Biol Evol 13(3), 451-461, 1996

38 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

Strain PassportDSM 30083 Escherichia coli

Strain Passport
DSM 30083 Escherichia coli