Strain Passport
CCUG 27877 Sinorhizobium fredii

accession#	description	strainnumber	date	length
HQ143405	Sinorhizobium fredii strain USDA205 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	USDA 205 T USDA 205 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2011/10/04	821
HQ438229	Sinorhizobium fredii strain LMG6217 DNA gyrase subunit B (gyrB) gene, partial cds	LMG 6217 T LMG 6217 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2011/04/04	1076
JF288918	Sinorhizobium fredii strain HAMBI 2075 trehalose utilization protein (thuA) gene, partial cds	HAMBI 2075 T HAMBI 2075 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2011/02/16	687
GU994072	Sinorhizobium fredii strain USDA 205 NodC (nodC) gene, partial cds	USDA 205 T USDA 205 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2010/05/19	831
GU111404	Sinorhizobium fredii strain USDA205 23S ribosomal RNA gene, partial sequence	USDA 205 T USDA 205 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2010/01/12	342
GU111380	Sinorhizobium fredii strain USDA205 NifD-like (nifD) and NifK-like (nifK) genes, partial sequence	USDA 205 T USDA 205 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2010/01/12	1153
DQ403440	Sinorhizobium fredii strain LMG6217 23S ribosomal RNA gene, partial sequence	LMG 6217 T LMG 6217 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2009/11/30	509
DQ403439	Sinorhizobium fredii strain LMG6217 clone SF191R putative replication protein A and hypothetical protein genes, partial cds	LMG 6217 T LMG 6217 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2009/11/30	528
DQ403438	Sinorhizobium fredii strain LMG6217 clone SF190R putative transcriptional regulator protein and esterase genes, partial cds	LMG 6217 T LMG 6217 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2009/11/30	543
DQ403437	Sinorhizobium fredii strain LMG6217 clone SF188R putative nitrogen regulatory IIA protein (ptsN2) gene, partial cds	LMG 6217 T LMG 6217 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2009/11/30	459
DQ403436	Sinorhizobium fredii strain LMG6217 clone SF178R putative 2-keto-gluconate dehydrogenase subunit gene, complete cds; and hypothetical protein gene, partial cds	LMG 6217 T LMG 6217 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2009/11/30	530
DQ403435	Sinorhizobium fredii strain LMG6217 clone SF175R putative glycosyltransferase protein gene, partial cds	LMG 6217 T LMG 6217 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2009/11/30	492
DQ403434	Sinorhizobium fredii strain LMG6217 clone SF172R probable sorbitol-binding protein (smoE) gene, partial cds	LMG 6217 T LMG 6217 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2009/11/30	415
DQ403433	Sinorhizobium fredii strain LMG6217 clone SF171R putative laminarinase LamR/endo-1,3-1,4- beta-glycanase (lamR) gene, partial cds	LMG 6217 T LMG 6217 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2009/11/30	566
DQ403432	Sinorhizobium fredii strain LMG6217 clone SF170R DNA-binding HTH domain-containing protein gene, partial cds	LMG 6217 T LMG 6217 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2009/11/30	543
DQ403431	Sinorhizobium fredii strain LMG6217 clone SF167R putative lipoprotein gene, partial cds	LMG 6217 T LMG 6217 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2009/11/30	411
DQ403430	Sinorhizobium fredii strain LMG6217 clone SF166R conserved hypothetical protein gene, partial cds	LMG 6217 T LMG 6217 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2009/11/30	417
DQ403429	Sinorhizobium fredii strain LMG6217 clone SF163R putative transposase gene, partial cds	LMG 6217 T LMG 6217 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2009/11/30	535
DQ403428	Sinorhizobium fredii strain LMG6217 clone SF162R IS3 family transposase and predicted transcriptional regulator genes, complete cds; and transcriptional regulator gene, partial cds	LMG 6217 T LMG 6217 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2009/11/30	518
DQ403427	Sinorhizobium fredii strain LMG6217 clone SF160R transcriptional regulator gene, partial cds	LMG 6217 T LMG 6217 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2009/11/30	527
DQ403426	Sinorhizobium fredii strain LMG6217 clone SF154R NTPase gene, partial cds	LMG 6217 T LMG 6217 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2009/11/30	438
DQ403425	Sinorhizobium fredii strain LMG6217 clone SF153R putative helicase gene, partial cds	LMG 6217 T LMG 6217 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2009/11/30	527
DQ403424	Sinorhizobium fredii strain LMG6217 clone SF142R putative putrescin binding protein gene, partial cds	LMG 6217 T LMG 6217 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2009/11/30	521
DQ403423	Sinorhizobium fredii strain LMG6217 clone SF138R hypothetical protein gene, partial cds	LMG 6217 T LMG 6217 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2009/11/30	490
DQ403422	Sinorhizobium fredii strain LMG6217 clone SF135R nitrate/nitrite regulatory protein and hypothetical protein genes, partial cds	LMG 6217 T LMG 6217 is type strain of: Ensifer fredii Rhizobium fredii Sinorhizobium fredii	2009/11/30	452

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publications

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Li QQ, Wang ET, Chang YL, Zhang YZ, Zhang YM, Sui XH, Chen WF, Chen WX Ensifer sojae sp. nov., isolated from root nodules of Glycine max grown in saline-alkaline soils Int J Syst Evol Microbiol 61(8), 1981-1988, 2011
Rincon-Rosales R, Lloret L, Ponce E, Martinez-Romero E Rhizobia with different symbiotic efficiencies nodulate Acaciella angustissima in Mexico, including Sinorhizobium chiapanecum sp. nov. which has common symbiotic genes with Sinorhizobium mexicanum FEMS Microbiol Ecol 67(1), 103-117, 2009
Martens M, Dawyndt P, Coopman R, Gillis M, De Vos P, Willems A Advantages of multilocus sequence analysis for taxonomic studies: a case study using 10 housekeeping genes in the genus Ensifer (including former Sinorhizobium) Int J Syst Evol Microbiol 58(1), 200-214, 2008
Martens M, Weidner S, Linke B, de Vos P, Gillis M, Willems A A prototype taxonomic microarray targeting the rpsA housekeeping gene permits species identification within the rhizobial genus Ensifer Syst Appl Microbiol 30(5), 390-400, 2007
Lloret L, Ormeno-Orrillo E, Rincon R, Martinez-Romero J, Rogel-Hernandez MA, Martinez-Romero E Ensifer mexicanus sp. nov. a new species nodulating Acacia angustissima (Mill.) Kuntze in Mexico Syst Appl Microbiol 30(4), 280-290, 2007
Martens M, Delaere M, Coopman R, De Vos P, Gillis M, Willems A Multilocus sequence analysis of Ensifer and related taxa Int J Syst Evol Microbiol 57(3), 489-503, 2007
Kwon SW, Park JY, Kim JS, Kang JW, Cho YH, Lim CK, Parker MA, Lee GB Phylogenetic analysis of the genera Bradyrhizobium, Mesorhizobium, Rhizobium and Sinorhizobium on the basis of 16S rRNA gene and internally transcribed spacer region sequences Int J Syst Evol Microbiol 55(1), 263-270, 2005
Selesi D, Schmid M, Hartmann A Diversity of Green-Like and Red-Like Ribulose-1,5-Bisphosphate Carboxylase/Oxygenase Large-Subunit Genes (cbbL) in Differently Managed Agricultural Soils Appl Environ Microbiol 71(1), 175-184, 2005
Vinardell JM, Ollero FJ, Hidalgo A, Lopez-Baena FJ, Medina C, Ivanov-Vangelov K, Parada M, Madinabeitia N, Espuny Mdel R, Bellogin RA, Camacho M, Rodriguez-Navarro DN, Soria-Diaz ME, Gil-Serrano AM, Ruiz-Sainz JE NolR regulates diverse symbiotic signals of Sinorhizobium fredii HH103 Mol Plant Microbe Interact 17(6), 676-685, 2004
Nanba K, King GM, Dunfield K Analysis of facultative lithotroph distribution and diversity on volcanic deposits by use of the large subunit of ribulose 1,5-bisphosphate carboxylase/oxygenase Appl Environ Microbiol 70(4), 2245-2253, 2004
Young JM The genus name Ensifer Casida 1982 takes priority over Sinorhizobium Chen et al. 1988, and Sinorhizobium morelense Wang et al. 2002 is a later synonym of Ensifer adhaerens Casida 1982. Is the combination "Sinorhizobium adhaerens" (Casida 1982) Willems et al. 2003 legitimate? Request for an Opinion Int J Syst Evol Microbiol 53(6), 2107-2110, 2003
Willems A, Fernandez-Lopez M, Munoz-Adelantado E, Goris J, De Vos P, Martinez-Romero E, Toro N, Gillis M Description of new Ensifer strains from nodules and proposal to transfer Ensifer adhaerens Casida 1982 to Sinorhizobium as Sinorhizobium adhaerens comb. nov. Request for an Opinion Int J Syst Evol Microbiol 53(4), 1207-1217, 2003
Saldana G, Martinez-Alcantara V, Vinardell JM, Bellogin R, Ruiz-Sainz JE, Balatti PA Genetic diversity of fast-growing rhizobia that nodulate soybean ( Glycine max L. Merr) Arch Microbiol 180(1), 45-52, 2003
van Berkum P, Terefework Z, Paulin L, Suomalainen S, Lindstrom K, Eardly BD Discordant phylogenies within the rrn loci of Rhizobia J Bacteriol 185(10), 2988-2998, 2003
Sawada H, Kuykendall LD, Young JM Changing concepts in the systematics of bacterial nitrogen-fixing legume symbionts J Gen Appl Microbiol 49(3), 155-179, 2003
Semsey S, Blaha B, Koles K, Orosz L, Papp PP Site-specific integrative elements of rhizobiophage 16-3 can integrate into proline tRNA (CGG) genes in different bacterial genera J Bacteriol 184(1), 177-182, 2002
Peng GX, Tan ZY, Wang ET, Reinhold-Hurek B, Chen WF, Chen WX Identification of isolates from soybean nodules in Xinjiang Region as Sinorhizobium xinjiangense and genetic differentiation of S. xinjiangense from Sinorhizobium fredii Int J Syst Evol Microbiol 52(2), 457-462, 2002
Gaunt MW, Turner SL, Rigottier-Gois L, Lloyd-Macgilp SA, Young JP Phylogenies of atpD and recA support the small subunit rRNA-based classification of rhizobia Int J Syst Evol Microbiol 51(6), 2037-2048, 2001
Sy A, Giraud E, Jourand P, Garcia N, Willems A, de Lajudie P, Prin Y, Neyra M, Gillis M, Boivin-Masson C, Dreyfus B Methylotrophic Methylobacterium bacteria nodulate and fix nitrogen in symbiosis with legumes J Bacteriol 183(1), 214-220, 2001
Young JM, Kuykendall LD, Martinez-Romero E, Kerr A, Sawada H A revision of Rhizobium Frank 1889, with an emended description of the genus, and the inclusion of all species of Agrobacterium Conn 1942 and Allorhizobium undicola de Lajudie et al. 1998 as new combinations: Rhizobium radiobacter, R. rhizogenes, R. rubi, R. undicola and R. vitis Int J Syst Evol Microbiol 51(1), 89-103, 2001
Turner SL, Young JP The glutamine synthetases of rhizobia: phylogenetics and evolutionary implications Mol Biol Evol 17(2), 309-319, 2000
De Lajudie, P, Willems, A, Pot, B, Dewettinck, D, Maestrojuan, G, Neyra, M, Collins, M D, Dreyfus, B, Kersters, K, Gillis, M Polyphasic taxonomy of Rhizobia: emendation of the genus Sinorhizobium and description of Sinorhizobium meliloti comb. nov., Sinorhizobium saheli sp. nov., and Sinorhizobium teranga sp. nov Int J Syst Bacteriol 44, 715-733, 1994
Oyaizu H, Matsumoto S, Minamisawa K, Gamou T Distribution of Rhizobia in leguminous plants surveyed by phylogenetic identification J Gen Appl Microbiol 39, 339-354, 1993
Yanagi M, Yamasato K Phylogenetic analysis of the family Rhizobiaceae and related bacteria by sequencing of 16S rRNA gene using PCR and DNA sequencer FEMS Microbiol Lett 107(1), 115-120, 1993
Willems A, Collins MD Phylogenetic analysis of rhizobia and agrobacteria based on 16S rRNA gene sequences Int J Syst Bacteriol 43(2), 305-313, 1993

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Strain PassportCCUG 27877 Sinorhizobium fredii

Strain Passport
CCUG 27877 Sinorhizobium fredii