Strain Passport
NRRL B-3784 Paracoccus pantotrophus

accession#	description	strainnumber	date	length
JF508203	Paracoccus denitrificans strain ATCC 17741 clone ControlB11 16S ribosomal RNA gene, partial sequence	ATCC 17741 T ATCC 17741 is type strain of: Paracoccus denitrificans	2011/04/18	673
JF508186	Paracoccus denitrificans strain ATCC 17741 clone ControlA04 16S ribosomal RNA gene, partial sequence	ATCC 17741 T ATCC 17741 is type strain of: Paracoccus denitrificans	2011/04/18	661
AB598745	Paracoccus pantotrophus gene for 16S rRNA, partial sequence, strain: JCM 6892	JCM 6892 T JCM 6892 is type strain of: Paracoccus denitrificans	2010/11/30	1385
HM060299	Paracoccus denitrificans strain ATCC 17741 putative nitrite reductase (nirK) gene, partial cds	ATCC 17741 T ATCC 17741 is type strain of: Paracoccus denitrificans	2010/08/03	516
EU909903	Paracoccus pantotrophus strain DSM 65 insertion sequence ISPpa9, complete sequence	DSM 65 T DSM 65 is type strain of: Paracoccus denitrificans	2008/08/24	812
EU909902	Paracoccus pantotrophus strain DSM 65 insertion sequence ISPpa8, complete sequence	DSM 65 T DSM 65 is type strain of: Paracoccus denitrificans	2008/08/24	1050
EU909901	Paracoccus pantotrophus strain DSM 65 insertion sequence ISPpa7, complete sequence	DSM 65 T DSM 65 is type strain of: Paracoccus denitrificans	2008/08/24	2731
AY498614	Paracoccus pantotrophus strain DSM65 putative ABC transporter periplasmicbinding protein (tauA) gene, partial cds; putative ABC transporter ATPbinding protein (tauB), putative ABC transporter permease component (tauC),putative taurine dehydrogenase small subunit (tauX), putative taurinedehydrogenase large subunit (tauY), sulfoacetaldehyde acetyltransferase(xsc), and hypothetical membrane protein (tauZ) genes, complete cds; andphosphate acetyltransferase (pta) gene, partial cds	DSM 65 T DSM 65 is type strain of: Paracoccus denitrificans	2004/04/02	8004
AY177682	Paracoccus pantotrophus insertion sequence ISPpa4 putative transposase gene, complete cds	DSM 65 T DSM 65 is type strain of: Paracoccus denitrificans	2003/01/19	1053
AJ440508	Paracoccus pantotrophus partial nosZ gene for nitrous oxide reductase	DSM 65 T DSM 65 is type strain of: Paracoccus denitrificans	2002/09/27	353
AF397210	Paracoccus pantotrophus plasmid pHG16-a RepB (repB) gene, partial cds; andRepC (repC) gene, complete cds	DSM 65 T DSM 65 is type strain of: Paracoccus denitrificans	2002/05/03	2112
Y17512	Paracoccus denitrificans strain IAM12479 16S rRNA gene	IAM 12479 T IAM 12479 is type strain of: Paracoccus denitrificans	1999/05/07	1424
Y17511	Paracoccus denitrificans strain JCM6892 16S rRNA gene	JCM 6892 T JCM 6892 is type strain of: Paracoccus denitrificans	1999/05/07	1418
Y16936	Paracoccus pantotrophus 16S rRNA gene, strain LMG 4218	LMG 4218 T LMG 4218 is type strain of: Paracoccus denitrificans	1999/05/07	1395
Y16935	Paracoccus pantotrophus 16S rRNA gene, strain DSM 65	DSM 65 T DSM 65 is type strain of: Paracoccus denitrificans	1999/05/07	1395
Y16929	Paracoccus denitrificans 16S rRNA gene, strain DSM 413	DSM 413 T DSM 413 is type strain of: Paracoccus denitrificans	1999/05/07	1395
Y16927	Paracoccus denitrificans 16S rRNA gene, strain ATCC 17741T	ATCC 17741 T ATCC 17741 is type strain of: Paracoccus denitrificans	1999/05/07	1395
AF017097	Paracoccus denitrificans F1-ATPase gamma-subunit (atpC) and F1-ATPasebeta-subunit (atpB) genes, partial cds	NCIB 11627 T NCIB 11627 is type strain of: Paracoccus denitrificans	1999/01/06	903
AJ001308	Paracoccus denitrificans NirI and NirX genes, and flanking regions	DSM 413 T DSM 413 is type strain of: Paracoccus denitrificans	1997/08/29	3158
X87287	P.denitrificans 23S rRNA gene	LMG 4218 T LMG 4218 is type strain of: Paracoccus denitrificans	1997/07/03	2847
U59631	Paracoccus denitrificans recA gene, complete cds	DSM 413 T DSM 413 is type strain of: Paracoccus denitrificans	1997/02/11	1071
U31902	Paracoccus denitrificans succinate dehydrogenase b-type cytochrome subunit(sdhC), succinate dehydrogenase hydrophobic membrane anchor (sdhD),succinate dehydrogenase flavoprotein subunit (sdhA), and succinatedehydrogenase iron-sulfur protein subunit (sdhB) genes, complete cds	ATCC 13543 T ATCC 13543 is type strain of: Paracoccus denitrificans	1995/09/06	6380
U17435	Paracoccus denitrificans Fnr-like transcriptional activator (nnr) gene,complete cds	DSM 413 T DSM 413 is type strain of: Paracoccus denitrificans	1995/06/10	993
U12464	Paracoccus denitrificans (ORF1) gene, partial cds, and LysR-typetranscriptional activator (mauR), (mauF), and methylamine dehydrogenaselarge subunit (mauB) genes, complete cds	DSM 413 T DSM 413 is type strain of: Paracoccus denitrificans	1994/10/25	3007
D13480	Paracoccus denitrificans 16S rRNA	IAM 12479 T IAM 12479 is type strain of: Paracoccus denitrificans	1994/03/18	1286

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publications

50 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]


Bruggemann C, Denger K, Cook AM, Ruff J Enzymes and genes of taurine and isethionate dissimilation in Paracoccus denitrificans Microbiology 150(4), 805-816, 2004
Bartosik D, Sochacka M, Baj J Identification and characterization of transposable elements of Paracoccus pantotrophus J Bacteriol 185(13), 3753-3763, 2003
Nogales B, Timmis KN, Nedwell DB, Osborn AM Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA Appl Environ Microbiol 68(10), 5017-5025, 2002
Bartosik D, Baj J, Piechucka E, Waker E, Wlodarczyk M Comparative characterization of repABC-type replicons of Paracoccus pantotrophus composite plasmids Plasmid 48(2), 130-141, 2002
(Unknown) Int J Syst Bacteriol 49, 938, 1999
Rainey FA, Kelly DP, Stackebrandt E, Burghardt J, Hiraishi A, Katayama Y, Wood AP A re-evaluation of the taxonomy of Paracoccus denitrificans and a proposal for the combination Paracoccus pantotrophus comb. nov Int J Syst Bacteriol 49 Pt 2, 645-651, 1999
Kawasaki H, Yamasato K, Sugiyama J Phylogenetic relationships of the helical-shaped bacteria in the alpha Proteobacteria inferred from 16S rDNA sequences J Gen Appl Microbiol 43(2), 89-95, 1997
Fernandez de Henestrosa AR, del Rey A, Tarrago R, Barbe J Cloning and characterization of the recA of Paracoccus denitrificans and construction of a recA-deficient mutant FEMS Microbiol Lett 147(2), 209-213, 1997
Gomelsky M, Kaplan S The Rhodobacter sphaeroides 2.4.1 rho gene: expression and genetic analysis of structure and function J Bacteriol 178(7), 1946-1954, 1996
Hovanec TA, DeLong EF Comparative analysis of nitrifying bacteria associated with freshwater and marine aquaria Appl Environ Microbiol 62(8), 2888-2896, 1996
Ludwig W, Rossello-Mora R, Aznar R, Klugbauer S, Spring S, Reetz K, Beimfohr C, Brockmann E, Kirchhof G, Dorn S, Bachleitner M, Klugbauer N, Springer N, Lane D, Nietupsky R, Weizenegger M, Schleifer KH Comparative sequence analysis of 23S rRNA from proteobacteria Syst Appl Microbiol 18, 164-188, 1995
Lafay B, Ruimy R, de Traubenberg CR, Breittmayer V, Gauthier MJ, Christen R Roseobacter algicola sp. nov., a new marine bacterium isolated from the phycosphere of the toxin-producing dinoflagellate Prorocentrum lima Int J Syst Bacteriol 45(2), 290-296, 1995
Van Spanning RJ, De Boer AP, Reijnders WN, Spiro S, Westerhoff HV, Stouthamer AH, Van der Oost J Nitrite and nitric oxide reduction in Paracoccus denitrificans is under the control of NNR, a regulatory protein that belongs to the FNR family of transcriptional activators FEBS Lett 360(2), 151-154, 1995
Van Spanning RJ, van der Palen CJ, Slotboom DJ, Reijnders WN, Stouthamer AH, Duine JA Expression of the mau genes involved in methylamine metabolism in Paracoccus denitrificans is under control of a LysR-type transcriptional activator Eur J Biochem 226(1), 201-210, 1994
Kawasaki H, Hoshino Y, Yamamoto K Phylogenetic diversity of phototrophic purple non-sulfur bacteria in the Proteobacteria alpha group FEMS Microbiol Lett 112, 61-66, 1993
Kawasaki H, Hoshino Y, Hirata A, Yamasato K Is intracytoplasmic membrane structure a generic criterion? It does not coincide with phylogenetic interrelationships among phototrophic purple nonsulfur bacteria Arch Microbiol 160(5), 358-362, 1993
Ludwig W, Mittenhuber G, Friedrich CG Transfer of Thiosphaera pantotropha to Paracoccus denitrificans Int J Syst Bacteriol 43(2), 363-367, 1993
Mayer-Miebach, E C, Schubert, H Biokatalytische Verringerung der Nitratkonzentration in pflanzlichen Lebensmittelrohstoffen BioEngin 2, 34-43, 1991
Urakami T, Araki H, Oyanagi H, Suzuki K, Komagata K Paracoccus aminophilus sp. nov. and Paracoccus aminovorans sp. nov., which utilize N,N-dimethylformamide Int J Syst Bacteriol 40(3), 287-291, 1990
Ohara M, Katayama Y, Tsuzaki M, Nakamoto S, Kuraishi H Paracoccus kocurii sp. nov., a tetramethylammonium-assimilating bacterium Int J Syst Bacteriol 40(3), 292-296, 1990
Malik, K A A simplified liquid-drying method for the preservation of microorganisms sensitive to freezing and freeze-drying J Microbiol Methods 12, 125-132, 1990
Urakami, T, Tamaoka, J, Suzuki, K-I, Komagata, K Paracoccus alcaliphilus sp. nov., an alkaliphilic and facultatively methylotrophic bacterium Int J Syst Bacteriol 39, 116-121, 1989
Sharma KD, Loehr TM, Sanders-Loehr J, Husain M, Davidson VL Resonance Raman spectroscopy of amicyanin, a blue copper protein from Paracoccus denitrificans J Biol Chem 263(7), 3303-3306, 1988
Malik, KA (Unknown) J Microbiol Meth 8, 259-271, 1988
Malik, K A A new freeze-drying method for the preservation of nitrogen-fixing and other fragile bacteria J Microbiol Methods 8, 259-271, 1988

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Strain PassportNRRL B-3784 Paracoccus pantotrophus

Strain Passport
NRRL B-3784 Paracoccus pantotrophus