Strain Passport
LMG 7892 Photobacterium damselae subsp. damselae

overview

species name

Photobacterium damselae subsp. damselae

all known species names for this strain
Photobacterium damselae subsp. damselae
Photobacterium damsela
Photobacterium damsela subsp. damsela
Photobacterium damselae

type strain of

Listonella damsela, Photobacterium damselae, Photobacterium damselae subsp. damselae, Vibrio damsela

16S Sequence

ADBS01000001 (LTP: AB032015)

strain numbers

ATCC 33539

BCRC 12906

CAIM 331

CCRC 12906

CCUG 13626

CDC 2588-80

CECT 626

CIP 102761

DSM 7482

DSMZ 7482

IFO (now NBRC) 15633

IFO 15633

KCTC 12323

KCTC 2734

LMG 7892

NBRC 15633

NCIMB 2184

NCMB 2184

NCTC 11647

availability map

BRC strain browser

history

This Histri was manually curated (last saved on 2012-03-14).

Histri

sequences

44 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

accession#	description	strainnumber	date	length
ADBS01000008	Photobacterium damselae subsp. damselae CIP 102761 Contig52, whole genome shotgun sequence	CIP 102761 T CIP 102761 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2009/11/18	15913
ADBS01000007	Photobacterium damselae subsp. damselae CIP 102761 Contig51, whole genome shotgun sequence	CIP 102761 T CIP 102761 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2009/11/18	18603
ADBS01000006	Photobacterium damselae subsp. damselae CIP 102761 Contig54, whole genome shotgun sequence	CIP 102761 T CIP 102761 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2009/11/18	49971
ADBS01000005	Photobacterium damselae subsp. damselae CIP 102761 Contig53, whole genome shotgun sequence	CIP 102761 T CIP 102761 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2009/11/18	64394
ADBS01000004	Photobacterium damselae subsp. damselae CIP 102761 Contig55, whole genome shotgun sequence	CIP 102761 T CIP 102761 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2009/11/18	149928
ADBS01000003	Photobacterium damselae subsp. damselae CIP 102761 Contig56, whole genome shotgun sequence	CIP 102761 T CIP 102761 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2009/11/18	203395
ADBS01000002	Photobacterium damselae subsp. damselae CIP 102761 Contig57, whole genome shotgun sequence	CIP 102761 T CIP 102761 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2009/11/18	1307345
ADBS01000001	Photobacterium damselae subsp. damselae CIP 102761 Contig58, whole genome shotgun sequence	CIP 102761 T CIP 102761 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2009/11/18	3236779
FJ971859	Photobacterium damselae strain ATCC 33539 16S ribosomal RNA gene, partial sequence	ATCC 33539 T ATCC 33539 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2009/06/18	807
EU164925	Photobacterium damselae subsp. damselae putative penicillin-binding protein 1A (Pbp-1A) gene, partial cds	DSMZ 7482 T DSMZ 7482 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2008/09/30	2433
AB364562	Photobacterium damselae subsp. damselae ompU gene for outer membrane protein U, partial cds, strain: ATCC 33539	ATCC 33539 T ATCC 33539 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2008/05/27	450
AB364543	Photobacterium damselae subsp. damselae toxR gene for transmembrane regulatory protein, partial cds, strain: ATCC 33539	ATCC 33539 T ATCC 33539 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2008/05/27	388
AB364524	Photobacterium damselae subsp. damselae gyrB gene for gyrase B, partial cds, strain: ATCC 33539	ATCC 33539 T ATCC 33539 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2008/05/27	539
AB298188	Photobacterium damselae subsp. damselae gyrB gene for gyrase B subunit, partial cds, strain: ATCC 33539	ATCC 33539 T ATCC 33539 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2008/01/05	1064
DQ907458	Photobacterium damselae subsp. damselae strain ATCC 33539 topoisomerase I (topA) gene, partial cds	ATCC 33539 T ATCC 33539 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2008/01/01	643
DQ907386	Photobacterium damselae subsp. damselae strain ATCC 33539 rod shaping protein MreB (mreB) gene, partial cds	ATCC 33539 T ATCC 33539 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2008/01/01	906
DQ907319	Photobacterium damselae subsp. damselae strain ATCC 33539 FtsZ (ftsZ) gene, partial cds	ATCC 33539 T ATCC 33539 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2008/01/01	656
DQ907258	Photobacterium damselae subsp. damselae strain ATCC 33539 glyceraldehyde-3-phosphate dehydrogenase (gapA) gene, partial cds	ATCC 33539 T ATCC 33539 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2008/01/01	847
EF380236	Photobacterium damselae subsp. damselae strain ATCC 33539 uridylate kinase (pyrH) gene, partial cds	ATCC 33539 T ATCC 33539 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2007/07/26	570
AB255703	Photobacterium damselae subsp. damselae DNA, 16S-23S rRNA intergenic spacer, partial sequence, strain: ATCC 33539	ATCC 33539 T ATCC 33539 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2006/04/18	238
AJ842541	Photobacterium damselae subsp. damselae partial rpoA gene for RNA polymerase alpha-subunit, strain LMG 7892T	LMG 7892 T LMG 7892 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2005/02/01	928
AJ842357	Photobacterium damselae subsp. damselae partial recA gene, strain LMG 7892T	LMG 7892 T LMG 7892 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2005/02/01	797
AY455889	Photobacterium damselae strain ATCC 33539 DNA gyrase subunit B (gyrB) gene, partial cds	ATCC 33539 T ATCC 33539 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2004/04/10	1213
AY191118	Photobacterium damselae subsp. damselae strain ATCC 33539 genomic region 2	ATCC 33539 T ATCC 33539 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2003/03/27	480
AY191098	Photobacterium damselae subsp. damselae strain ATCC 33539 genomic region 1	ATCC 33539 T ATCC 33539 is type strain of: Listonella damsela Photobacterium damselae Photobacterium damselae subsp. damselae Vibrio damsela	2003/03/27	670

44 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

publications

29 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]


Fernandez-No IC, Bohme K, Gallardo JM, Barros-Velazquez J, Canas B, Calo-Mata P Differential characterization of biogenic amine-producing bacteria involved in food poisoning using MALDI-TOF mass fingerprinting Electrophoresis 31(6), 1116-1127, 2010
Amagliani G, Omiccioli E, Andreoni F, Boiani R, Bianconi I, Zaccone R, Mancuso M, Magnani M Development of a multiplex PCR assay for Photobacterium damselae subsp. piscicida identification in fish samples J Fish Dis 32(8), 645-653, 2009
Takahashi H, Miya S, Kimura B, Yamane K, Arakawa Y, Fujii T Difference of genotypic and phenotypic characteristics and pathogenicity potential of Photobacterium damselae subsp. damselae between clinical and environmental isolates from Japan Microb Pathog 45(2), 150-158, 2008
Urbanczyk H, Ast JC, Higgins MJ, Carson J, Dunlap PV Reclassification of Vibrio fischeri, Vibrio logei, Vibrio salmonicida and Vibrio wodanis as Aliivibrio fischeri gen. nov., comb. nov., Aliivibrio logei comb. nov., Aliivibrio salmonicida comb. nov. and Aliivibrio wodanis comb. nov Int J Syst Evol Microbiol 57(12), 2823-2829, 2007
Thompson FL, Gevers D, Thompson CC, Dawyndt P, Naser S, Hoste B, Munn CB, Swings J Phylogeny and molecular identification of vibrios on the basis of multilocus sequence analysis Appl Environ Microbiol 71(9), 5107-5115, 2005
Osorio CR, Collins MD, Romalde JL, Toranzo AE Variation in 16S-23S rRNA intergenic spacer regions in Photobacterium damselae: a mosaic-like structure Appl Environ Microbiol 71(2), 636-645, 2005
Ast JC, Dunlap PV Phylogenetic analysis of the lux operon distinguishes two evolutionarily distinct clades of Photobacterium leiognathi Arch Microbiol 181(5), 15034641, 2004
Osorio CR, Collins MD, Romalde JL, Toranzo AE Characterization of the 23S and 5S rRNA genes and 23S-5S intergenic spacer region (ITS-2) of Photobacterium damselae Dis Aquat Organ 61(1-2), 33-39, 2004
Takahashi H, Kimura B, Yoshikawa M, Fujii T Cloning and sequencing of the histidine decarboxylase genes of gram-negative, histamine-producing bacteria and their application in detection and identification of these organisms in fish Appl Environ Microbiol 69(5), 2568-2579, 2003
Gyllenberg M, Koski T, Dawyndt P, Lund T, Thompson F, Austin B, Swings J New methods for the analysis of binarized BIOLOG GN data of Vibrio species: minimization of stochastic complexity and cumulative classification Syst Appl Microbiol 25(3), 403-415, 2002
Kwok AY, Wilson JT, Coulthart M, Ng LK, Mutharia L, Chow AW Phylogenetic study and identification of human pathogenic Vibrio species based on partial hsp60 gene sequences Can J Microbiol 48(10), 903-910, 2002
Notification that new names and new combinations have appeared in volume 50, part 3, of the IJSEM Int J Syst Evol Microbiol 50 Pt 4, 1419-1420, 2000
Kimura B, Hokimoto S, Takahashi H, Fujii T Photobacterium histaminum Okuzumi et al. 1994 is a later subjective synonym of Photobacterium damselae subsp. damselae (Love et al. 1981) Smith et al. 1991 Int J Syst Evol Microbiol 50 Pt 3, 1339-1342, 2000
Osorio CR, Klose KE A region of the transmembrane regulatory protein ToxR that tethers the transcriptional activation domain to the cytoplasmic membrane displays wide divergence among Vibrio species J Bacteriol 182(2), 526-528, 2000
Trüper HG, De' Clari L Taxonomic note: necessary correction of specific epithets formed as substantives (nouns) "in apposition" Int J Syst Bacteriol 47, 908-909, 1997
(Unknown) Int J Syst Bacteriol 47, 1276, 1997
Ishimaru, K, Akagawa-Matsushita, M, Muroga, K Vibrio penaeicida sp. nov., a pathogen of Kuruma prawns (Penaeus japonicus) Int J Syst Bacteriol 45, 134-138, 1995
(Unknown) Int J Syst Bacteriol 45, 423, 1995
Gauthier G, Lafay B, Ruimy R, Breittmayer V, Nicolas JL, Gauthier M, Christen R Small-subunit rRNA sequences and whole DNA relatedness concur for the reassignment of Pasteurella piscicida (Snieszko et al.) Janssen and Surgalla to the genus Photobacterium as Photobacterium damsela subsp. piscicida comb. nov Int J Syst Bacteriol 45(1), 139-144, 1995
Wiik R, Stackebrandt E, Valle O, Daae FL, Rodseth OM, Andersen K Classification of fish-pathogenic vibrios based on comparative 16S rRNA analysis Int J Syst Bacteriol 45(3), 421-428, 1995
Ruimy R, Breittmayer V, Elbaze P, Lafay B, Boussemart O, Gauthier M, Christen R Phylogenetic analysis and assessment of the genera Vibrio, Photobacterium, Aeromonas, and Plesiomonas deduced from small-subunit rRNA sequences Int J Syst Bacteriol 44(3), 416-426, 1994
Kita-Tsukamoto K, Oyaizu H, Nanba K, Simidu U Phylogenetic relationships of marine bacteria, mainly members of the family Vibrionaceae, determined on the basis of 16S rRNA sequences Int J Syst Bacteriol 43(1), 8-19, 1993
Smith SK, Sutton DC, Fuerst JA, Reichelt JL Evaluation of the genus Listonella and reassignment of Listonella damsela (Love et al.) MacDonell and Colwell to the genus Photobacterium as Photobacterium damsela comb. nov. with an emended description Int J Syst Bacteriol 41(4), 529-534, 1991
(Unknown) Int J Syst Bacteriol 41, 533, 1991
Validation of the publication of new names and new combinations previously effectively published outside the IJSB. List No. 20 Int J Syst Bacteriol 36, 354-356, 1986

29 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

Strain PassportLMG 7892 Photobacterium damselae subsp. damselae

Strain Passport
LMG 7892 Photobacterium damselae subsp. damselae