Strain Passport
NCIB 12058 Nocardia farcinica

overview

species name

all known species names for this strain
*Nocardia farcinica*
Mycobacterium farcinogenes subsp. senegalense(?)
Mycobacterium farcinogenes
Nocardia asteroides

type strain of

Nocardia farcinica

16S Sequence

AF430033 (LTP: Z36936)

strain numbers

ATCC 3318

BCRC 13380

BCRC 13722

CBS 318.60

CCRC 13380

CCRC 13722

CCTM La 3404

CCUG 10109

CCUG 27778

CCUG 48656

CECT 3053

CECT 4069

CGMCC 4.1166

CGMCC 4.1829

CIP 104775

CNU N700

DSM 43245

DSM 43578

DSM 43665

DSMZ 43665

EB1957

GA 819

GA 919

Goodfellow M258

IEGM 621

IFM 28

IFM 284

IFO 15532

IMET 7137

IMET 7377

IMRU 3318

IMSNU 21224

JCM 3088

KCC A-0088

KCTC 9958

LMG 4079

N240

N58

NBRC 15532

NCIB 12058

NCIMB 12058

NCTC 11134

NCTC 4524

NRRL B-2089

PCM 2173

Ridell N671

S645

VAC 330

Waksman 3318

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SeqRank

history

This Histri was manually curated (last saved on 2008-08-21).

Histri

sequences

33 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

accession#	description	strainnumber	date	length
JN215786	Nocardia farcinica strain NRRL B-2089 RNA polymerase beta subunit (rpoB) gene, partial cds	NRRL B-2089 T NRRL B-2089 is type strain of: Nocardia farcinica	2011/11/07	400
GU236390	Nocardia farcinica strain ATCC 3318 clone 4 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	ATCC 3318 T ATCC 3318 is type strain of: Nocardia farcinica	2011/11/01	644
GU236389	Nocardia farcinica strain ATCC 3318 clone 3 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	ATCC 3318 T ATCC 3318 is type strain of: Nocardia farcinica	2011/11/01	644
GU236388	Nocardia farcinica strain ATCC 3318 clone 2 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	ATCC 3318 T ATCC 3318 is type strain of: Nocardia farcinica	2011/11/01	640
GU236387	Nocardia farcinica strain ATCC 3318 clone 1 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	ATCC 3318 T ATCC 3318 is type strain of: Nocardia farcinica	2011/11/01	640
JF745937	Nocardia farcinica strain DSM43665 chaperonin-60 (cpn60) gene, partial cds	DSM 43665 T DSM 43665 is type strain of: Nocardia farcinica	2011/09/25	552
JN042156	Nocardia farcinica strain NRRL B-2089 SecA1 (secA1) gene, partial cds	NRRL B-2089 T NRRL B-2089 is type strain of: Nocardia farcinica	2011/06/21	445
JN041919	Nocardia farcinica strain NRRL B-2089 heat shock protein 65 (hsp65) gene, partial cds	NRRL B-2089 T NRRL B-2089 is type strain of: Nocardia farcinica	2011/06/21	401
JN041682	Nocardia farcinica strain NRRL B-2089 16S ribosomal RNA gene, partial sequence	NRRL B-2089 T NRRL B-2089 is type strain of: Nocardia farcinica	2011/06/21	462
JN041445	Nocardia farcinica strain NRRL B-2089 DNA gyrase subunit B (gyrB) gene, partial cds	NRRL B-2089 T NRRL B-2089 is type strain of: Nocardia farcinica	2011/06/21	482
GQ853065	Nocardia farcinica strain W6977 16S ribosomal RNA gene, partial sequence	ATCC 3318 T ATCC 3318 is type strain of: Nocardia farcinica	2009/09/29	1441
GQ496115	Nocardia farcinica culture-collection CDC<USA-GA>:W6977 DNA gyrase subunit B (gyrB) gene, partial cds	ATCC 3318 T ATCC 3318 is type strain of: Nocardia farcinica	2009/09/27	1246
GQ217499	Nocardia farcinica culture collection CDC<USA-GA>:W6977 16S ribosomal RNA gene, partial sequence	ATCC 3318 T ATCC 3318 is type strain of: Nocardia farcinica	2009/07/07	1441
DQ085117	Nocardia farcinica strain DSM 43578 RNA polymerase beta subunit (rpoB) gene, partial cds	DSM 43578 T DSM 43578 is type strain of: Nocardia farcinica	2007/12/30	438
DQ518339	Nocardia farcinica strain CGMCC 4.1166 16S-23S ribosomal RNA intergenic spacer, complete sequence	CGMCC 4.1166 T CGMCC 4.1166 is type strain of: Nocardia farcinica	2006/12/22	341
AB014169	Nocardia farcinica gyrB gene for DNA gyrase B subunit, partial cds, strain IFO 15532	IFO 15532 T IFO 15532 is type strain of: Nocardia farcinica	2006/12/11	1254
DQ659906	Nocardia farcinica strain ATCC 3318 16S ribosomal RNA gene, partial sequence	ATCC 3318 T ATCC 3318 is type strain of: Nocardia farcinica	2006/08/08	1389
DQ360274	Nocardia farcinica strain ATCC 3318 SecA1 (secA1) gene, partial cds	ATCC 3318 T ATCC 3318 is type strain of: Nocardia farcinica	2006/08/08	470
AB243742	Nocardia farcinica rpoB gene for RNA polymerase beta subunit, partial cds	IFM 284 T IFM 284 is type strain of: Nocardia farcinica	2005/12/07	772
AB243741	Nocardia farcinica rpoB2 gene for RNA polymerase beta subunit, partial cds	IFM 284 T IFM 284 is type strain of: Nocardia farcinica	2005/12/07	683
AY756551	Nocardia farcinica strain DSM 43665 16S ribosomal RNA gene, partial sequence	DSM 43578 T DSM 43578 is type strain of: Nocardia farcinica	2005/09/30	606
AY756523	Nocardia farcinica strain DSM 43665 65 kDa heat shock protein (hsp65) gene, partial cds	DSM 43578 T DSM 43578 is type strain of: Nocardia farcinica	2005/09/21	441
AY781800	Nocardia farcinica strain ATCC 3318 SecA1 gene, partial cds	ATCC 3318 T ATCC 3318 is type strain of: Nocardia farcinica	2005/03/09	700
AY766191	Nocardia farcinica strain ATCC 3318 65 kDa heat shock protein (groEL) gene,partial cds	ATCC 3318 T ATCC 3318 is type strain of: Nocardia farcinica	2004/12/01	305
CL215612	PCR314 Nocardia farcinica PCR amplification of genomic DNA Nocardia farcinica genomic clone 3318T 5', genomic survey sequence	ATCC 3318 T ATCC 3318 is type strain of: Nocardia farcinica	2004/08/13	314

33 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

publications

39 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]


McTaggart LR, Richardson SE, Witkowska M, Zhang SX Phylogeny and identification of Nocardia species on the basis of multilocus sequence analysis J Clin Microbiol 48(12), 4525-4533, 2010
Moser BD, Klenk HP, Schumann P, Potter G, Lasker BA, Steigerwalt AG, Hinrikson HP, Brown JM Nocardia niwae sp. nov., isolated from human pulmonary sources Int J Syst Evol Microbiol , 2010
Rodriguez-Nava V, Couble A, Devulder G, Flandrois J-P, Boiron P, Laurent F Use of PCR-Restriction Enzyme Pattern Analysis and Sequencing Database for hsp65 Gene-Based Identification of Nocardia Species J Clin Microbiol 44(2), 536-546, 2006
Ishikawa J, Chiba K, Kurita H, Satoh H Contribution of rpoB2 RNA Polymerase {beta} Subunit Gene to Rifampin Resistance in Nocardia Species Antimicrob Agents Chemother 50(4), 1342-1346, 2006
Conville PS, Zelazny AM, Witebsky FG Analysis of secA1 gene sequences for identification of Nocardia species J Clin Microbiol 44(8), 2760-2766, 2006
Zelazny AM, Calhoun LB, Li L, Shea YR, Fischer SH Identification of Mycobacterium species by secA1 sequences J Clin Microbiol 43(3), 1051-1058, 2005
Patel JB, Wallace RJ Jr, Brown-Elliott BA, Taylor T, Imperatrice C, Leonard DG, Wilson RW, Mann L, Jost KC, Nachamkin I Sequence-based identification of aerobic actinomycetes J Clin Microbiol 42(6), 2530-2540, 2004
Brown JM, Pham KN, McNeil MM, Lasker BA Rapid identification of Nocardia farcinica clinical isolates by a PCR assay targeting a 314-base-pair species-specific DNA fragment J Clin Microbiol 42(8), 3655-3660, 2004
Roth A, Andrees S, Kroppenstedt RM, Harmsen D, Mauch H Phylogeny of the genus Nocardia based on reassessed 16S rRNA gene sequences reveals underspeciation and division of strains classified as Nocardia asteroides into three established species and two unnamed taxons J Clin Microbiol 41(2), 851-856, 2003
Yassin AF, Straubler B, Schumann P, Schaal KP Nocardia puris sp. nov Int J Syst Evol Microbiol 53(5), 1595-1599, 2003
Albuquerque de Barros EV, Manfio GP, Ribiero Maitan V, Mendes Bataus LA, Kim SB, Maldonado LA, Goodfellow M Nocardia cerradoensis sp. nov., a novel isolate from Cerrado soil in Brazil Int J Syst Evol Microbiol 53(1), 29-33, 2003
Zhang J, Liu Z, Goodfellow M Nocardia caishijiensis sp. nov., a novel soil actinomycete Int J Syst Evol Microbiol 53(4), 999-1004, 2003
Nishiuchi Y, Baba T, Hotta HH, Yano I Mycolic acid analysis in Nocardia species. The mycolic acid compositions of Nocardia asteroides, N. farcinica, and N. nova J Microbiol Methods 37(2), 111-122, 1999
Baba T, Nishiuchi Y, Yano I Composition of Mycolic Acid Molecular Species as a Criterion in Nocardial Classification Int J Syst Bacteriol 47, 795-801, 1997
Rainey FA, Burghardt J, Kroppenstedt RM, Klatte S, Stackebrandt E Phylogenetic analysis of the genera Rhodococcus and Norcardia and evidence for the evolutionary origin of the genus Nocardia from within the radiation of Rhodococcus species Microbiology 141, 523-528, 1995
Ochi K Phylogenetic analysis of mycolic acid-containing wall-chemotype IV actinomycetes and allied taxa by partial sequencing of ribosomal protein AT-L30 Int J Syst Bacteriol 45(4), 653-660, 1995
Chun J, Goodfellow M A phylogenetic analysis of the genus Nocardia with 16S rRNA gene sequences Int J Syst Bacteriol 45(2), 240-245, 1995
Ruimy R, Boiron P, Boivin V, Christen R A phylogeny of the genus Nocardia deduced from the analysis of small-subunit ribosomal DNA sequences, including transfer of Nocardia amarae to the genus Gordona as Gordona amarae comb. nov FEMS Microbiol Lett 123(3), 261-267, 1994
Wallace RJ Jr, Tsukamura M, Brown BA, Brown J, Steingrube VA, Zhang YS, Nash DR Cefotaxime-resistant Nocardia asteroides strains are isolates of the controversial species Nocardia farcinica J Clin Microbiol 28(12), 2726-2732, 1990
K?pfer, P, Dott, Wand Kroppenstedt, RM (Unknown) J Gen Appl Microbiol 36, 309-331, 1990
Yano, I, Imaeda, T, Tsukamura, M Characterization of Nocardia nova Int J Syst Bacteriol 40, 170-174, 1990
Yassin, A F, Brzezinka, H, Schaal, K P, Trüper, H G, Pulverer, G Menaquinone composition in the classification and identification of aerobic actinomycetes Zentralbl Bakteriol Hyg 267, 339-356, 1988
Kudo, T, Hatai, K, Seino, A Nocardia seriolae sp. nov. causing nocardiosis of cultured fish Int J Syst Bacteriol 38, 173-178, 1988
Watanable, K, Shimizu, H, Aihara, H, Nakamura, R, Suzuki, K, Komagata, K (Unknown) J Gen Appl Microbiol 32, 100-200, 1986
(Unknown) Microbiol Immun 26, 1101, 1982

39 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

Strain PassportNCIB 12058 Nocardia farcinica

Strain Passport
NCIB 12058 Nocardia farcinica