Strain Passport
GIFU 2500 Flavobacterium johnsoniae

overview

species name

Flavobacterium johnsoniae

all known species names for this strain
*Flavobacterium johnsoniae*

type strain of

Cytophaga johnsonae, Flavobacterium johnsoniae

strain numbers

ATCC 17061 ^{T

ATCC 17061 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , BCRC 14874 ^{T

BCRC 14874 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , C4 ^{T

C4 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , C4 (Cytophaga johnsonii) ^{T

C4 (Cytophaga johnsonii) is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , CCRC 14874 ^{T

CCRC 14874 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , CCUG 35202 ^{T

CCUG 35202 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , CECT 5015 ^{T

CECT 5015 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , CFBP 3036 ^{T

CFBP 3036 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , CIP 100931 ^{T

CIP 100931 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , Cy j3 ^{T

Cy j3 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , D.M. Webley ^{T

D.M. Webley is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , DSM 2064 ^{T

DSM 2064 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , DSMZ 425 ^{T

DSMZ 425 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , GIFU 2500 ^{T

GIFU 2500 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , HMSMYX.1.1.1 ^{T

HMSMYX.1.1.1 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , IAM 14304 ^{T

IAM 14304 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , IFO 14942 ^{T

IFO 14942 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , JCM 8514 ^{T

JCM 8514 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , LMD 96.103 ^{T

LMD 96.103 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , LMG 1340 ^{T

LMG 1340 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , LMG 1341 ^{T

LMG 1341 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , MYX 1.1.1 ^{T

MYX 1.1.1 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , MYX.1.1.1 ^{T

MYX.1.1.1 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , NBRC 14942 ^{T

NBRC 14942 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , NCCB 96103 ^{T

NCCB 96103 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , NCIB 11054 ^{T

NCIB 11054 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , NCIMB 11054 ^{T

NCIMB 11054 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , Reichenbach Cy j 3 ^{T

Reichenbach Cy j 3 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , strain C4 ^{T

strain C4 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae} , van Niel MYX 1.1.1 ^{T

van Niel MYX 1.1.1 is type strain of:

Cytophaga johnsonae

Flavobacterium johnsoniae}

availability map

BRC strain browser

history

This Histri was manually curated (last saved on 2008-08-21).

Histri

sequences

127 items found, displaying 1 to 25.[First/Prev] 1, 2, 3, 4, 5, 6 [Next/Last]

accession#	description	strainnumber	date	length
AB472806	Flavobacterium johnsoniae tuf gene for elongation factor Tu, partial cds,strain: JCM 8514	JCM 8514 ^{T JCM 8514 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2009/12/10	774
EI702768	SHI-A05 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to endonuclease, genomic surveysequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	492
EI702769	SHI-C06 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to exported peptidyl-prolylcis-trans isomerase, genomic survey sequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	405
EI702771	SHI-F24 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to iron-sulfur cluster-bindingprotein, genomic survey sequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	555
EI702772	SHI-E12 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to lipoprotein releasing systemtransmembrane protein, genomic survey sequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	372
EI702770	SHII-D02 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to glycosyltransferase, genomicsurvey sequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	429
EI702773	SHII-F01 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to metallopeptidase, genomicsurvey sequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	872
EI702775	SHI-D05 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to N utilization substanceprotein, genomic survey sequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	524
EI702777	SHII-A09 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to racemase, genomic surveysequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	210
EI702695	SHI-H03 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to 3-methyl-2-oxobutanoatehydroxymethyltransferase, genomic survey sequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	165
EI702704	SHI-A09 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to Arginine/ornithine transportsystem ATPase, genomic survey sequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	750
EI702703	SHII-A04 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to Amidinotransferase superfamily,genomic survey sequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	270
EI702702	SHII-C05 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to ABC-type sugar transportsystems, ATPase components, genomic survey sequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	189
EI702701	SHII-E12 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to ABC transporter, ATP-bindingprotein, genomic survey sequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	406
EI702700	SHI-H10 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to ABC transporter efflux protein,genomic survey sequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	443
EI702699	SHI-E03 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to putative 60 kDa heat shockprotein, genomic survey sequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	289
EI702698	SHI-B02 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to 5-enolpyruvylshikimate3-phosphate synthase, genomic survey sequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	447
EI702697	SHI-H09 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to 50S ribosomal protein L4,genomic survey sequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	171
EI702696	SHI-B01 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to 50S ribosomal protein L2,genomic survey sequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	480
EI702708	SHII-H07 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to Carbonicanhydrases/acetyltransferases, isoleucine patch superfamily, genomic surveysequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	138
EI702707	SHI-H06 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to Beta-ketoacyl synthase, genomicsurvey sequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	693
EI702706	SHI-E02 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to ATP-dependent Zn proteases,genomic survey sequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	627
EI702705	SHI-B07 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to ATP-dependent RNA helicase,genomic survey sequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	732
EI702694	SHII-E02 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to putative 30S ribosomal proteinS10, genomic survey sequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	192
EI702776	SHII-E11 Flavobacterium columnare subtractive hybridization libraryFlavobacterium columnare genomic similar to phosphoesterase, genomic surveysequence	ATCC 17061 ^{T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae}	2008/05/01	483

127 items found, displaying 1 to 25.[First/Prev] 1, 2, 3, 4, 5, 6 [Next/Last]

publications

24 items found, displaying all items.


Nelson SS, Bollampalli S, McBride MJ SprB is a cell surface component of the Flavobacterium johnsoniae gliding motility machinery J Bacteriol 190(8), 2851-2857, 2008
Nelson SS, Glocka PP, Agarwal S, Grimm DP, McBride MJ Flavobacterium johnsoniae SprA is a cell surface protein involved in gliding motility J Bacteriol 189(19), 7145-7150, 2007
Nelson SS, McBride MJ Mutations in Flavobacterium johnsoniae secDF result in defects in gliding motility and chitin utilization. J Bacteriol 188(1), 348-351, 2006
Welker TL, Shoemaker CA, Arias CR, Klesius PH Transmission and detection of Flavobacterium columnare in channel catfish Ictalurus punctatus Dis Aquat Organ 63(2-3), 129-138, 2005
Braun TF, Khubbar MK, Saffarini DA, McBride MJ Flavobacterium johnsoniae gliding motility genes identified by mariner mutagenesis J Bacteriol 187(20), 6943-6952, 2005
Naas T, Bellais S, Nordmann P Molecular and biochemical characterization of a carbapenem-hydrolysing beta-lactamase from Flavobacterium johnsoniae J Antimicrob Chemother 51(2), 267-273, 2003
Hunnicutt DW, Kempf MJ, McBride MJ Mutations in Flavobacterium johnsoniae gldF and gldG disrupt gliding motility and interfere with membrane localization of GldA J Bacteriol 184(9), 2370-2378, 2002
Hamana K, Nakagawa Y Polyamine distribution profiles in newly validated genera and species within the Flavobacterium-Flexibacter-Cytophaga-Sphingobacterium complex Microbios 106 Suppl 2, 105-116, 2001
Suzuki M, Nakagawa Y, Harayama S, Yamamoto S Phylogenetic analysis and taxonomic study of marine Cytophaga-like bacteria: proposal for Tenacibaculum gen. nov. with Tenacibaculum maritimum comb. nov. and Tenacibaculum ovolyticum comb. nov., and description of Tenacibaculum mesophilum sp. nov. and Tenacibaculum amylolyticum sp. nov Int J Syst Evol Microbiol 51(5), 1639-1652, 2001
Kempf MJ, McBride MJ Transposon insertions in the Flavobacterium johnsoniae ftsX gene disrupt gliding motility and cell division J Bacteriol 182(6), 1671-1679, 2000
Hunnicutt DW, McBride MJ Cloning and characterization of the Flavobacterium johnsoniae gliding-motility genes gldB and gldC J Bacteriol 182(4), 911-918, 2000
Agarwal S, Hunnicutt DW, McBride MJ Cloning and characterization of the Flavobacterium johnsoniae (Cytophaga johnsonae) gliding motility gene, gldA Proc Natl Acad Sci U S A 94(22), 12139-12144, 1997
Bernardet J-F, Segers P, Vancanneyt M, Berthe F, Kersters K, Vandamme P Cutting a Gordian knot: emended classification and description of the genus Flavobacterium, emended description of the family Flavobacteriaceae, and proposal of Flavobacterium hydatis nom. nov. (basonym Cytophaga aquatilis Strohl and Tait 1978) Int J Syst Bacteriol 46, 128-148, 1996
McBride MJ, Kempf MJ Development of techniques for the genetic manipulation of the gliding bacterium Cytophaga johnsonae J Bacteriol 178(3), 583-590, 1996
(Unknown) Int J Syst Bacteriol 46, 627, 1996
Nakagawa Y, Yamasato K Phylogenetic diversity of the genus Cytophaga revealed by 16S rRNA sequencing and menaquinone analysis J Gen Microbiol 139 Pt 6, 1155-1161, 1993
Gherna R, Woese CR A partial phylogenetic analysis of the "flavobacter-bacteroides" phylum: basis for taxonomic restructuring Syst Appl Microbiol 15(4), 513-521, 1992
Bernardet, J-F, Grimont, P A D Deoxyribonucleic acid relatedness and phenotypic characterization of Flexibacter columnaris sp. nov., nom. rev., Flexibacter psychrophilus sp. nov., nom rev., and Flexibacter maritimus Wakabayashi, Hikida, and Masumura 1986 Int J Syst Bacteriol 39, 346-354, 1989
Oyaizu, H, Komagata, K Chemotaxonomic and phenotypic characterization of the strains of species in the Flavobacterium-Cytophaga complex J Gen Appl Microbiol 27, 57-107, 1981
Approved Lists of Bacterial Names Int J Syst Bacteriol 30, 225-420, 1980
(Unknown) Int J Syst Bacteriol 30, 289, 1980
Mandel, M., Leadbetter, E. R. Deoxyribonucleic acid base composition of myxobacteria J Bacteriol 90, 1795-1796, 1965
Stanier RY Studies on Nonfruiting Myxobacteria: I. Cytophaga johnsonae, n.sp., a Chitin-decomposing Myxobacterium J Bacteriol 53(3), 297-315, 1947
Reichenbach, H Genus I. Cytophaga Winogradsky 1929, 577AL, emend p 2015-2050

24 items found, displaying all items.

Strain PassportGIFU 2500 Flavobacterium johnsoniae

Strain Passport
GIFU 2500 Flavobacterium johnsoniae