Strain Passport
ATCC 700750 Rhizobium tropici

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81 items found, displaying 1 to 25.[First/Prev] 1, 2, 3, 4 [Next/Last]

accession#	description	strainnumber	date	length
JX863573	Rhizobium tropici CIAT 899 nitrogenase reductase (nifH) gene, complete cds	CIAT 899 T CIAT 899 is type strain of: Rhizobium tropici	2013/04/24	918
CP004018	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence	CIAT 899 T CIAT 899 is type strain of: Rhizobium tropici	2013/01/04	2083197
CP004017	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899b, complete sequence	CIAT 899 T CIAT 899 is type strain of: Rhizobium tropici	2013/01/04	549467
CP004016	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899a, complete sequence	CIAT 899 T CIAT 899 is type strain of: Rhizobium tropici	2013/01/04	216610
CP004015	Rhizobium tropici CIAT 899, complete genome	CIAT 899 T CIAT 899 is type strain of: Rhizobium tropici	2013/01/04	3837060
JX064393	Rhizobium tropici CIAT 899 ThrA (thrA) gene, partial cds	CIAT 899 T CIAT 899 is type strain of: Rhizobium tropici	2012/12/05	646
JX064321	Rhizobium tropici CIAT 899 TruA (truA) gene, partial cds	CIAT 899 T CIAT 899 is type strain of: Rhizobium tropici	2012/12/05	415
JX064249	Rhizobium tropici CIAT 899 hypothetical protein (SMc00019) gene, partial cds	CIAT 899 T CIAT 899 is type strain of: Rhizobium tropici	2012/12/05	337
JN580681	Rhizobium tropici CIAT 899 N-acetylglucosaminyl transferase (nodC) gene, partial cds	CIAT 899 T CIAT 899 is type strain of: Rhizobium tropici	2012/02/01	608
AB680818	Rhizobium tropici gene for 16S rRNA, partial sequence, strain: NBRC 15247	NBRC 15247 T NBRC 15247 is type strain of: Rhizobium tropici	2011/12/11	1406
JN685621	Rhizobium tropici strain USDA 9030 aspartate-semialdehyde dehydrogenase (asd) gene, complete cds	CIAT 899 T CIAT 899 is type strain of: Rhizobium tropici	2011/11/24	1035
HQ394237	Rhizobium tropici CIAT 899 endoglucanase (celC) gene, partial cds	CIAT 899 T CIAT 899 is type strain of: Rhizobium tropici	2011/10/05	763
HQ824719	Rhizobium tropici CIAT 899 N-acetylglucosaminyltransferase (nodC) gene, partial cds	CIAT 899 T CIAT 899 is type strain of: Rhizobium tropici	2011/07/26	863
HQ438238	Rhizobium tropici strain LMG9503 DNA gyrase subunit B (gyrB) gene, partial cds	LMG 9503 T LMG 9503 is type strain of: Rhizobium tropici	2011/04/04	1076
HM010770	Rhizobium tropici CIAT 899 putative flavin-nucleotide-binding protein gene, partial cds; putative acetyltransferase, putative aminoglycoside 6'-N-acetyltransferase, and ornithine lipid hydroxylase (olsE) genes, complete cds; and putative thiamine pyrophosphate dependent dehydrogenase gene, partial cds	CIAT 899 T CIAT 899 is type strain of: Rhizobium tropici	2011/03/31	3765
HQ850704	Rhizobium tropici CIAT 899 16S ribosomal RNA gene, partial sequence	CIAT 899 T CIAT 899 is type strain of: Rhizobium tropici	2011/02/27	1471
HM768892	Rhizobium tropici CIAT 899 BgvA (bgvA) gene, complete cds	CIAT 899 T CIAT 899 is type strain of: Rhizobium tropici	2010/11/30	1496
FN433087	Rhizobium tropici otsA gene for Trehalose-6-phosphate synthase, isolate CIAT 899	CIAT 899 T CIAT 899 is type strain of: Rhizobium tropici	2010/07/22	967
GQ249915	Rhizobium tropici strain CIAT899 two component sensor histidine kinase protein gene, partial cds	CIAT 899 T CIAT 899 is type strain of: Rhizobium tropici	2009/07/14	1087
GQ249914	Rhizobium tropici strain CIAT899 KgtR gene, partial cds	CIAT 899 T CIAT 899 is type strain of: Rhizobium tropici	2009/07/14	342
GQ249913	Rhizobium tropici strain CIAT899 KgtP gene, partial cds	CIAT 899 T CIAT 899 is type strain of: Rhizobium tropici	2009/07/14	579
GQ249912	Rhizobium tropici strain CIAT899 dctBD operon, partial sequence; and DctA (dctA) gene, partial cds	CIAT 899 T CIAT 899 is type strain of: Rhizobium tropici	2009/07/14	790
FM213295	Rhizobium tropici partial hrcA gene for heat-inducible transcription repressor, type strain LMG 9503T	LMG 9503 T LMG 9503 is type strain of: Rhizobium tropici	2009/07/05	621
FM213247	Rhizobium tropici partial ribonuclease P RNA (rnpB gene), type strain LMG 9503T	LMG 9503 T LMG 9503 is type strain of: Rhizobium tropici	2009/07/05	297
FM213149	Rhizobium tropici partial rpoD gene for RNA polymerase sigma factor, type strain LMG 9503T	LMG 9503 T LMG 9503 is type strain of: Rhizobium tropici	2009/07/05	606

81 items found, displaying 1 to 25.[First/Prev] 1, 2, 3, 4 [Next/Last]

41 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

Rincon-Rosales R, Villalobos-Escobedo JM, Rogel MA, Martinez J, Ormeno-Orrillo E, Martinez-Romero E Rhizobium calliandrae sp. nov., Rhizobium mayense sp. nov. and Rhizobium jaguaris sp. nov., rhizobial species nodulating the medicinal legume Calliandra grandiflora Int J Syst Evol Microbiol , 2013
Aserse AA, Rasanen LA, Assefa F, Hailemariam A, Lindstrom K Phylogeny and genetic diversity of native rhizobia nodulating common bean (Phaseolus vulgaris L.) in Ethiopia Syst Appl Microbiol 35(2), 22265597, 2012
Zhang YM, Tian CF, Sui XH, Chen WF, Chen WX Robust markers reflecting phylogeny and taxonomy of rhizobia PLoS One 7(9), e44936, 2012
Ormeno-Orrillo E, Menna P, Almeida LG, Ollero FJ, Nicolas MF, Pains Rodrigues E, Shigueyoshi Nakatani A, Silva Batista JS, Oliveira Chueire LM, Souza RC, Ribeiro Vasconcelos AT, Megias M, Hungria M, Martinez-Romero E Genomic basis of broad host range and environmental adaptability of Rhizobium tropici CIAT 899 and Rhizobium sp. PRF 81 which are used in inoculants for common bean (Phaseolus vulgaris L.) BMC Genomics 13(1), 735, 2012
Pulawska J, Kaluzna M Phylogenetic relationship and genetic diversity of Agrobacterium spp. isolated in Poland based on gyrB gene sequence analysis and RAPD Eur J Plant Pathol 133(2), 379-390, 2012
Vences-Guzman MA, Guan Z, Ormeno-Orrillo E, Gonzalez-Silva N, Lopez-Lara IM, Martinez-Romero E, Geiger O, Sohlenkamp C Hydroxylated ornithine lipids increase stress tolerance in Rhizobium tropici CIAT899 Mol Microbiol 79(6), 1496-1514, 2011
Robledo M, Velazquez E, Ramirez-Bahena MH, Garcia-Fraile P, Perez-Alonso A, Rivas R, Martinez-Molina E, Mateos PF The celC gene, a new phylogenetic marker useful for taxonomic studies in Rhizobium Syst Appl Microbiol 34(6), 393-399, 2011
Fernandez-Aunion C, Hamouda TB, Iglesias-Guerra F, Argandona M, Reina-Bueno M, Nieto JJ, Aouani ME, Vargas C Biosynthesis of compatible solutes in rhizobial strains isolated from Phaseolus vulgaris nodules in Tunisian fields BMC Microbiol 10, 192, 2010
Batista S, Patriarca EJ, Tate R, Martinez-Drets G, Gill PR An alternative succinate (2-oxoglutarate) transport system in Rhizobium tropici is induced in nodules of Phaseolus vulgaris J Bacteriol 191(16), 5057-5067, 2009
Ribeiro RA, Barcellos FG, Thompson FL, Hungria M Multilocus sequence analysis of Brazilian Rhizobium microsymbionts of common bean (Phaseolus vulgaris L.) reveals unexpected taxonomic diversity Res Microbiol 160(4), 297-306, 2009
Martens M, Dawyndt P, Coopman R, Gillis M, De Vos P, Willems A Advantages of multilocus sequence analysis for taxonomic studies: a case study using 10 housekeeping genes in the genus Ensifer (including former Sinorhizobium) Int J Syst Evol Microbiol 58(1), 200-214, 2008
Ormeno-Orrillo E, Rosenblueth M, Luyten E, Vanderleyden J, Martinez-Romero E Mutations in lipopolysaccharide biosynthetic genes impair maize rhizosphere and root colonization of Rhizobium tropici CIAT899 Environ Microbiol 10(5), 1271-1284, 2008
Eardly BD, Nour SM, van Berkum P, Selander RK Rhizobial 16S rRNA and dnaK genes: mosaicism and the uncertain phylogenetic placement of Rhizobium galegae Appl Environ Microbiol 71(3), 1328-1335, 2005
Kwon SW, Park JY, Kim JS, Kang JW, Cho YH, Lim CK, Parker MA, Lee GB Phylogenetic analysis of the genera Bradyrhizobium, Mesorhizobium, Rhizobium and Sinorhizobium on the basis of 16S rRNA gene and internally transcribed spacer region sequences Int J Syst Evol Microbiol 55(1), 263-270, 2005
Silva C, Vinuesa P, Eguiarte LE, Souza V, Martinez-Romero E Evolutionary genetics and biogeographic structure of Rhizobium gallicum sensu lato, a widely distributed bacterial symbiont of diverse legumes Mol Ecol 14(13), 4033-4050, 2005
Rojas-Jimenez K, Sohlenkamp C, Geiger O, Martinez-Romero E, Dietrich W, Vinuesa P A chloride channel homolog and ornithine-containing membrane lipids of Rhizobium tropici CIAT899 are involved in symbiotic efficiency and acid tolerance Mol Plant Microbe Interact 18(11), 1175-1185, 2005
Depret G, Houot S, Allard MR, Breuil MC, Nouaim R, Laguerre G Long-term effects of crop management on Rhizobium leguminosarum biovar viciae populations FEMS Microbiol Ecol 51(1), 87-97, 2004
Vinuesa P, Neumann-Silkow F, Pacios-Bras C, Spaink HP, Martinez-Romero E, Werner D Genetic analysis of a pH-regulated operon from Rhizobium tropici CIAT899 involved in acid tolerance and nodulation competitiveness Mol Plant Microbe Interact 16(2), 159-168, 2003
Stepkowski T, Czaplinska M, Miedzinska K, Moulin L The variable part of the dnaK gene as an alternative marker for phylogenetic studies of rhizobia and related alpha Proteobacteria Syst Appl Microbiol 26(4), 483-494, 2003
van Berkum P, Terefework Z, Paulin L, Suomalainen S, Lindstrom K, Eardly BD Discordant phylogenies within the rrn loci of Rhizobia J Bacteriol 185(10), 2988-2998, 2003
Sawada H, Kuykendall LD, Young JM Changing concepts in the systematics of bacterial nitrogen-fixing legume symbionts J Gen Appl Microbiol 49(3), 155-179, 2003
Gaunt MW, Turner SL, Rigottier-Gois L, Lloyd-Macgilp SA, Young JP Phylogenies of atpD and recA support the small subunit rRNA-based classification of rhizobia Int J Syst Evol Microbiol 51(6), 2037-2048, 2001
Marroqui S, Zorreguieta A, Santamaria C, Temprano F, Soberon M, Megias M, Downie JA Enhanced symbiotic performance by Rhizobium tropici glycogen synthase mutants J Bacteriol 183(3), 854-864, 2001
Tan Z, Hurek T, Vinuesa P, Muller P, Ladha JK, Reinhold-Hurek B Specific detection of Bradyrhizobium and Rhizobium strains colonizing rice (Oryza sativa) roots by 16S-23S ribosomal DNA intergenic spacer-targeted PCR Appl Environ Microbiol 67(8), 3655-3664, 2001
Young JM, Kuykendall LD, Martinez-Romero E, Kerr A, Sawada H A revision of Rhizobium Frank 1889, with an emended description of the genus, and the inclusion of all species of Agrobacterium Conn 1942 and Allorhizobium undicola de Lajudie et al. 1998 as new combinations: Rhizobium radiobacter, R. rhizogenes, R. rubi, R. undicola and R. vitis Int J Syst Evol Microbiol 51(1), 89-103, 2001

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