Strain Passport
A.3.12 Pseudomonas putida

accession#	description	strainnumber	date	length
JN397516	Pseudomonas putida strain LMG2257 pyrroloquinoline quinone synthase (pqqC) gene, partial cds	LMG 2257 T LMG 2257 is type strain of: Pseudomonas putida	2011/09/06	524
GU937093	Pseudomonas putida strain ATCC 12633 60 kDa chaperonin (cpn60) gene, partial cds	ATCC 12633 T ATCC 12633 is type strain of: Pseudomonas putida	2011/03/08	555
AB560230	Pseudomonas putida gene for 30S ribosomal protein S11, complete cds, strain: NBRC 14164	NBRC 14164 T NBRC 14164 is type strain of: Pseudomonas putida	2010/11/04	390
AB560229	Pseudomonas putida gene for 30S ribosomal protein S13, complete cds, strain: NBRC 14164	NBRC 14164 T NBRC 14164 is type strain of: Pseudomonas putida	2010/11/04	357
AB560228	Pseudomonas putida gene for 50S ribosomal protein L36, complete cds, strain: NBRC 14164	NBRC 14164 T NBRC 14164 is type strain of: Pseudomonas putida	2010/11/04	117
AB560227	Pseudomonas putida gene for 50S ribosomal protein L30, complete cds, strain: NBRC 14164	NBRC 14164 T NBRC 14164 is type strain of: Pseudomonas putida	2010/11/04	177
AB560226	Pseudomonas putida gene for 50S ribosomal protein L18, complete cds, strain: NBRC 14164	NBRC 14164 T NBRC 14164 is type strain of: Pseudomonas putida	2010/11/04	351
AB560225	Pseudomonas putida gene for 30S ribosomal protein S8, complete cds, strain: NBRC 14164	NBRC 14164 T NBRC 14164 is type strain of: Pseudomonas putida	2010/11/04	393
AB560224	Pseudomonas putida gene for 30S ribosomal protein S14, complete cds, strain: NBRC 14164	NBRC 14164 T NBRC 14164 is type strain of: Pseudomonas putida	2010/11/04	306
AB560223	Pseudomonas putida gene for 50S ribosomal protein L24, complete cds, strain: NBRC 14164	NBRC 14164 T NBRC 14164 is type strain of: Pseudomonas putida	2010/11/04	315
AB560222	Pseudomonas putida gene for 50S ribosomal protein L14, complete cds, strain: NBRC 14164	NBRC 14164 T NBRC 14164 is type strain of: Pseudomonas putida	2010/11/04	369
AB560221	Pseudomonas putida gene for 30S ribosomal protein S17, complete cds, strain: NBRC 14164	NBRC 14164 T NBRC 14164 is type strain of: Pseudomonas putida	2010/11/04	267
AB560220	Pseudomonas putida gene for 50S ribosomal protein L29, complete cds, strain: NBRC 14164	NBRC 14164 T NBRC 14164 is type strain of: Pseudomonas putida	2010/11/04	192
AB560219	Pseudomonas putida gene for 50S ribosomal protein L22, complete cds, strain: NBRC 14164	NBRC 14164 T NBRC 14164 is type strain of: Pseudomonas putida	2010/11/04	333
AB560218	Pseudomonas putida gene for 30S ribosomal protein S19, complete cds, strain: NBRC 14164	NBRC 14164 T NBRC 14164 is type strain of: Pseudomonas putida	2010/11/04	276
AB560217	Pseudomonas putida gene for 50S ribosomal protein L23, complete cds, strain: NBRC 14164	NBRC 14164 T NBRC 14164 is type strain of: Pseudomonas putida	2010/11/04	300
AB560216	Pseudomonas putida gene for 30S ribosomal protein S10, complete cds, strain: NBRC 14164	NBRC 14164 T NBRC 14164 is type strain of: Pseudomonas putida	2010/11/04	312
FJ418635	Pseudomonas putida strain BCRC 10459 DNA gyrase subunit B (gyrB) gene, partial cds	BCRC 10459 T BCRC 10459 is type strain of: Pseudomonas putida	2008/12/16	1003
EU014559	Pseudomonas putida strain BCRC 10459 16S-23S ribosomal RNA intergenic spacer, complete sequence	BCRC 10459 T BCRC 10459 is type strain of: Pseudomonas putida	2008/08/30	317
EU014558	Pseudomonas putida strain BCRC 10459 16S-23S ribosomal RNA intergenic spacer, complete sequence	BCRC 10459 T BCRC 10459 is type strain of: Pseudomonas putida	2008/08/30	471
EU014557	Pseudomonas putida strain BCRC 10459 16S-23S ribosomal RNA intergenic spacer, complete sequence	BCRC 10459 T BCRC 10459 is type strain of: Pseudomonas putida	2008/08/30	508
AB353855	Pseudomonas putida davA gene for delta-aminovaleramidase, complete cds, strain: ATCC 12633	ATCC 12633 T ATCC 12633 is type strain of: Pseudomonas putida	2008/07/05	795
AB353854	Pseudomonas putida davB gene for lysine 2-monooxygenase, complete cds, strain: ATCC 12633	ATCC 12633 T ATCC 12633 is type strain of: Pseudomonas putida	2008/07/05	1683
EU031752	Pseudomonas sp. BS2 16S ribosomal RNA gene, partial sequence	BS2 T BS2 is type strain of: Pseudomonas putida	2007/08/07	1400
AM284967	Pseudomonas putida bfd gene for benzoylformate decarboxylase, allele C	ATCC 12633 T ATCC 12633 is type strain of: Pseudomonas putida	2006/06/29	1587

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publications

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Meyer JB, Frapolli M, Keel C, Maurhofer M A novel molecular marker for studying phylogeny and diversity of phosphate-solubilizing pseudomonads: the pyrroloquinoline quinone biosynthetic gene pqqC Appl Environ Microbiol , 2011
Bala Subramanian S, Yan S, Tyagi RD, Surampalli RY Extracellular polymeric substances (EPS) producing bacterial strains of municipal wastewater sludge: isolation, molecular identification, EPS characterization and performance for sludge settling and dewatering Water Res 44(7), 2253-2266, 2010
Chevalier S, Bodilis J, Jaouen T, Barray S, Feuilloley MGJ, Orange N Sequence diversity of the OprD protein of environmental Pseudomonas strains Environ Microbiol 9(3), 824-835, 2007
Henning H, Leggewie C, Pohl M, Muller M, Eggert T, Jaeger KE Identification of novel benzoylformate decarboxylases by growth selection. Appl Environ Microbiol 72(12), 7510-7517, 2006
Ait Tayeb L, Ageron E, Grimont F, Grimont PA Molecular phylogeny of the genus Pseudomonas based on rpoB sequences and application for the identification of isolates Res Microbiol 156(5-6), 763-773, 2005
Muramatsu H, Mihara H, Kakutani R, Yasuda M, Ueda M, Kurihara T, Esaki N The putative malate/lactate dehydrogenase from Pseudomonas putida is an NADPH-dependent delta1-piperideine-2-carboxylate/delta1-pyrroline-2-carboxylate reductase involved in the catabolism of D-lysine and D-proline J Biol Chem 280(7), 5329-5335, 2005
Hill JE, Penny SL, Crowell KG, Goh SH, Hemmingsen SM cpnDB: a chaperonin sequence database Genome Res 14(8), 1669-1675, 2004
Hilario EM, Buckley TR, Young JM Improved resolution on the phylogenetic relationships among Pseudomonasby the combined analysis of atpD, carA, recA and 16S rDNA Antonie Van Leeuwenhoek 86(1), 51-64, 2004
McLeish MJ, Kneen MM, Gopalakrishna KN, Koo CW, Babbitt PC, Gerlt JA, Kenyon GL Identification and characterization of a mandelamide hydrolase and an NAD(P)+-dependent benzaldehyde dehydrogenase from Pseudomonas putida ATCC 12633 J Bacteriol 185(8), 2451-2456, 2003
Tamaki H, Hanada S, Kamagata Y, Nakamura K, Nomura N, Nakano K, Matsumura M Flavobacterium limicola sp. nov., a psychrophilic, organic-polymer-degrading bacterium isolated from freshwater sediments Int J Syst Evol Microbiol 53(2), 519-526, 2003
Diard S, Carlier JP, Ageron E, Grimont PA, Langlois V, Guerin P, Bouvet OM Accumulation of poly(3-hydroxybutyrate) from octanoate in different pseudomonas belonging to the rRNA homology group I Syst Appl Microbiol 25(2), 183-188, 2002
Francis CA, Tebo BM cumA multicopper oxidase genes from diverse Mn(II)-oxidizing and non-Mn(II)-oxidizing Pseudomonas strains Appl Environ Microbiol 67(9), 4272-4278, 2001
Notification that new names and new combinations have appeared in volume 51, part 1, of the IJSEM Int J Syst Evol Microbiol 51(2), 269, 2001
Uchino M, Shida O, Uchimura T, Komagata K Recharacterization of Pseudomonas fulva Iizuka and Komagata 1963, and proposals of Pseudomonas parafulva sp. nov. and Pseudomonas cremoricolorata sp. nov J Gen Appl Microbiol 47(5), 247-261, 2001
Chun J, Rhee MS, Han JI, Bae KS Arthrobacter siderocapsulatus Dubinina and Zhdanov 1975AL is a later subjective synonym of Pseudomonas putida (Trevisan 1889) Migula 1895AL Int J Syst Evol Microbiol 51(1), 169-170, 2001
Yamamoto S, Kasai H, Arnold DL, Jackson RW, Vivian A, Harayama S Phylogeny of the genus Pseudomonas: intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genes Microbiology 146 ( Pt 10), 2385-2394, 2000
Pandza S, Baetens M, Park CH, Au T, Keyhan M, Matin A The G-protein FlhF has a role in polar flagellar placement and general stress response induction in Pseudomonas putida Mol Microbiol 36(2), 414-423, 2000
Karpouzas DG, Morgan JA, Walker A Isolation and characterization of 23 carbofuran-degrading bacteria from soils from distant geographical areas Lett Appl Microbiol 31(5), 353-358, 2000
Vermeiren H, Willems A, Schoofs G, de Mot R, Keijers V, Hai W, Vanderleyden J The rice inoculant strain Alcaligenes faecalis A15 is a nitrogen-fixing Pseudomonas stutzeri Syst Appl Microbiol 22(2), 215-224, 1999
De Vos D, Bouton C, Sarniguet A, De Vos P, Vauterin M, Cornelis P Sequence diversity of the oprI gene, coding for major outer membrane lipoprotein I, among rRNA group I pseudomonads J Bacteriol 180(24), 6551-6556, 1998
Yamamoto S, Harayama S Phylogenetic relationships of Pseudomonas putida strains deduced from the nucleotide sequences of gyrB, rpoD and 16S rRNA genes Int J Syst Bacteriol 48 Pt 3, 813-819, 1998
Hasson MS, Muscate A, McLeish MJ, Polovnikova LS, Gerlt JA, Kenyon GL, Petsko GA, Ringe D The crystal structure of benzoylformate decarboxylase at 1.6 A resolution: diversity of catalytic residues in thiamin diphosphate-dependent enzymes Biochemistry 37(28), 9918-9930, 1998
Anzai Y, Kudo Y, Oyaizu H The phylogeny of the genera Chryseomonas, Flavimonas, and Pseudomonas supports synonymy of these three genera Int J Syst Bacteriol 47(2), 249-251, 1997
Moore ERB, Mau M, Arnscheidt A, Boettger EC, Hutson RA, Collins MD, Van de Peer Y, De Wachter R, Timmis KN The determination and comparison of the 16S rRNA gene sequences of species of the genus Pseudomonas (sensu stricto) and estimation of the natural intrageneric relationships Syst Appl Microbiol 19, 478-492, 1996
Yamamoto S, Harayama S PCR amplification and direct sequencing of gyrB genes with universal primers and their application to the detection and taxonomic analysis of Pseudomonas putida strains Appl Environ Microbiol 61(3), 1104-1109, 1995

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Strain PassportA.3.12 Pseudomonas putida

Strain Passport
A.3.12 Pseudomonas putida