Strain Passport
PDDCC 204 Xanthomonas cassavae

overview

species name

all known species names for this strain
*Xanthomonas cassavae*

type strain of

Xanthomonas cassavae

16S Sequence

Y10762

strain numbers

CFBP 4642

D.W. Dye ZD1

DSM 18958

Dye ZD1

HMB 54

ICMP 204

LMG 673

NCPPB 101

NZRCC 10370

PDDCC 204

VdM 147

availability map

strain browser

SeqRank

history

This Histri was manually curated (last saved on 2008-08-20).

Histri

sequences

22 items found, displaying all items.

accession#	description	strainnumber	date	length
KF306202	Xanthomonas cassavae CFBP 4642 strain LMG 673 TonB-dependent receptor (fyuA) gene, partial cds	LMG 673 T LMG 673 is type strain of: Xanthomonas cassavae	2013/10/28	698
KF306189	Xanthomonas cassavae CFBP 4642 strain LMG 673 RNA polymerase sigma factor (rpoD) gene, partial cds	LMG 673 T LMG 673 is type strain of: Xanthomonas cassavae	2013/10/28	870
KF306175	Xanthomonas cassavae CFBP 4642 strain LMG 673 GTP binding protein (lepA) gene, partial cds	LMG 673 T LMG 673 is type strain of: Xanthomonas cassavae	2013/10/28	390
KF306161	Xanthomonas cassavae CFBP 4642 strain LMG 673 DNA gyrase B (gyrB) gene, partial cds	LMG 673 T LMG 673 is type strain of: Xanthomonas cassavae	2013/10/28	530
KF306147	Xanthomonas cassavae CFBP 4642 strain LMG 673 glutamine synthetase A (glnA) gene, partial cds	LMG 673 T LMG 673 is type strain of: Xanthomonas cassavae	2013/10/28	887
KF306133	Xanthomonas cassavae CFBP 4642 strain LMG 673 elongation factor P (efp) gene, partial cds	LMG 673 T LMG 673 is type strain of: Xanthomonas cassavae	2013/10/28	389
KF306119	Xanthomonas cassavae CFBP 4642 strain LMG 673 class I heat-shock protein (dnaK) gene, partial cds	LMG 673 T LMG 673 is type strain of: Xanthomonas cassavae	2013/10/28	893
KF306105	Xanthomonas cassavae CFBP 4642 strain LMG 673 F1-F0-ATPase subunit (atpD) gene, partial cds	LMG 673 T LMG 673 is type strain of: Xanthomonas cassavae	2013/10/28	747
HM569156	Xanthomonas cassavae culture-collection LMG:673 DNA gyrase subunit B (gyrB) gene, partial cds	LMG 673 T LMG 673 is type strain of: Xanthomonas cassavae	2012/02/01	773
HM569072	Xanthomonas cassavae culture-collection LMG:673 elongation factor P (efp) gene, partial cds	LMG 673 T LMG 673 is type strain of: Xanthomonas cassavae	2012/02/01	387
HM568989	Xanthomonas cassavae culture-collection LMG:673 70 kDa heat shock protein (dnaK) gene, partial cds	LMG 673 T LMG 673 is type strain of: Xanthomonas cassavae	2012/02/01	762
HM568905	Xanthomonas cassavae culture-collection LMG:673 F1-F0-ATPase subunit (atpD) gene, partial cds	LMG 673 T LMG 673 is type strain of: Xanthomonas cassavae	2012/02/01	747
HM181575	Xanthomonas cassavae clone K0901 chromosomal repliciation initiation factor (dnaA) gene, partial cds	ICMP 204 T ICMP 204 is type strain of: Xanthomonas cassavae	2011/05/25	558
HQ896480	Xanthomonas cassavae strain CFBP 4642 quinate dehydrogenase (qumA) gene, partial cds	CFBP 4642 T CFBP 4642 is type strain of: Xanthomonas cassavae	2011/04/20	353
EU499084	Xanthomonas cassavae strain ICMP 204 RNA polymerase sigma factor (rpoD) gene, partial cds	ICMP 204 T ICMP 204 is type strain of: Xanthomonas cassavae	2008/11/03	870
EU498965	Xanthomonas cassavae strain ICMP 204 gyrase subunit B (gyrB) gene, partial cds	ICMP 204 T ICMP 204 is type strain of: Xanthomonas cassavae	2008/11/03	865
EU498861	Xanthomonas cassavae strain ICMP 204 TonB-dependent receptor (fyuA) gene, partial cds	ICMP 204 T ICMP 204 is type strain of: Xanthomonas cassavae	2008/11/03	698
EU498759	Xanthomonas cassavae strain ICMP 204 chaperone protein (dnaK) gene, partial cds	ICMP 204 T ICMP 204 is type strain of: Xanthomonas cassavae	2008/11/03	940
EU007525	Xanthomonas cassavae strain NCPPB 101 DNA gyrase B (gyrB) gene, partial cds	NCPPB 101 T NCPPB 101 is type strain of: Xanthomonas cassavae	2007/07/18	530
AY227425	Xanthomonas cassavae strain LMG 673 leucine-responsive regulatory protein(lrp) gene, partial cds	LMG 673 T LMG 673 is type strain of: Xanthomonas cassavae	2004/02/20	460
AF209756	Xanthomonas cassavae strain LMG673 16S-23S ribosomal RNA intergenic spacer,complete sequence	LMG 673 T LMG 673 is type strain of: Xanthomonas cassavae	2001/11/21	513
Y10762	X.cassavae 16S rRNA gene	LMG 673 T LMG 673 is type strain of: Xanthomonas cassavae	1997/04/01	1502

22 items found, displaying all items.

publications

7 items found, displaying all items.


Pothier JF, Pagani MC, Pelludat C, Ritchie DF, Duffy B A duplex-PCR method for species- and pathovar-level identification and detection of the quarantine plant pathogen Xanthomonas arboricola pv. pruni J Microbiol Methods 86(1), 21477624, 2011
Schneider KL, Marrero G, Alvarez AM, Presting GG Classification of Plant Associated Bacteria Using RIF, a Computationally Derived DNA Marker PLoS One 6(4), e18496, 2011
Young JM, Park DC, Shearman HM, Fargier E A multilocus sequence analysis of the genus Xanthomonas Syst Appl Microbiol 31(5), 366-377, 2008
Parkinson N, Aritua V, Heeney J, Cowie C, Bew J, Stead D Phylogenetic analysis of Xanthomonas species by comparison of partial gyrase B gene sequences Int J Syst Evol Microbiol 57(12), 2881-2887, 2007
Cubero J, Graham JH The leucine-responsive regulatory protein (lrp) gene for characterization of the relationship among Xanthomonas species Int J Syst Evol Microbiol 54(2), 429-437, 2004
Goncalves ER, Rosato YB Phylogenetic analysis of Xanthomonas species based upon 16S-23S rDNA intergenic spacer sequences Int J Syst Evol Microbiol 52(2), 355-361, 2002
Hauben L, Vauterin L, Swings J, Moore ER Comparison of 16S ribosomal DNA sequences of all Xanthomonas species Int J Syst Bacteriol 47(2), 328-335, 1997

7 items found, displaying all items.

Strain PassportPDDCC 204 Xanthomonas cassavae

Strain Passport
PDDCC 204 Xanthomonas cassavae