Strain Passport
NCPPB 411 Xanthomonas arboricola pv. juglandis

overview

species name

all known species names for this strain
Xanthomonas arboricola pv. juglandis
Xanthomonas arboricola
Xanthomonas campestris pv. juglandis

type strain of

Xanthomonas arboricola

16S Sequence

Y10757

strain numbers

ATCC 49083

CFBP 2528

DSM 18808

Dye S3

ICMP 35

ICPB XJ123

LMG 747

NCAIM B.01395

NCPPB 411

NZRCC 10406

PDDCC 35

VdM 79

Xanthomonas arboricola pv. Juglandis^T

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SeqRank

history

This Histri was manually curated (last saved on 2010-08-11).

Histri

sequences

22 items found, displaying all items.

accession#	description	strainnumber	date	length
HM569145	Xanthomonas arboricola pv. juglandis culture-collection LMG:747 DNA gyrase subunit B (gyrB) gene, partial cds	LMG 747 T LMG 747 is type strain of: Xanthomonas arboricola	2012/02/01	773
HM569062	Xanthomonas arboricola pv. juglandis culture-collection LMG:747 elongation factor P (efp) gene, partial cds	LMG 747 T LMG 747 is type strain of: Xanthomonas arboricola	2012/02/01	387
HM568978	Xanthomonas arboricola pv. juglandis culture-collection LMG:747 70 kDa heat shock protein (dnaK) gene, partial cds	LMG 747 T LMG 747 is type strain of: Xanthomonas arboricola	2012/02/01	762
HM568894	Xanthomonas arboricola pv. juglandis culture-collection LMG:747 F1-F0-ATPase subunit (atpD) gene, partial cds	LMG 747 T LMG 747 is type strain of: Xanthomonas arboricola	2012/02/01	747
JF826947	Xanthomonas arboricola pv. juglandis strain CFBP2528 type III effector protein (xopV) gene, partial cds	CFBP 2528 T CFBP 2528 is type strain of: Xanthomonas arboricola	2012/01/16	852
JF826939	Xanthomonas arboricola pv. juglandis strain CFBP2528 type III effector protein (xopQ) gene, partial cds	CFBP 2528 T CFBP 2528 is type strain of: Xanthomonas arboricola	2012/01/16	846
JF826881	Xanthomonas arboricola pv. juglandis strain CFBP2528 type III effector protein (xopA) gene, partial cds	CFBP 2528 T CFBP 2528 is type strain of: Xanthomonas arboricola	2012/01/16	321
JF759848	Xanthomonas arboricola pv. juglandis strain CFBP2528 RNA polymerase sigma factor (rpoD) gene, partial cds	CFBP 2528 T CFBP 2528 is type strain of: Xanthomonas arboricola	2012/01/16	612
HM181657	Xanthomonas arboricola pv. juglandis clone K0883 chromosomal repliciation initiation factor (dnaA) gene, partial cds	ICMP 35 T ICMP 35 is type strain of: Xanthomonas arboricola	2011/05/25	558
HQ896478	Xanthomonas arboricola pv. juglandis strain CFBP 2528 quinate dehydrogenase (qumA) gene, partial cds	CFBP 2528 T CFBP 2528 is type strain of: Xanthomonas arboricola	2011/04/20	353
AB558555	Xanthomonas arboricola pv. juglandis gene for 16S rRNA, partial sequence, strain: NCPPB 411	NCPPB 411 T NCPPB 411 is type strain of: Xanthomonas arboricola	2011/04/08	1450
FN667783	Xanthomonas arboricola pv. juglandis partial rpoD gene for RNA polymerase sigma subunit, strain NCPPB 411	NCPPB 411 T NCPPB 411 is type strain of: Xanthomonas arboricola	2010/05/13	597
FN667772	Xanthomonas arboricola pv. juglandis partial gyrB gene for DNA gyrase subunit B, strain NCPPB 411	NCPPB 411 T NCPPB 411 is type strain of: Xanthomonas arboricola	2010/05/13	775
FN667761	Xanthomonas arboricola pv. juglandis partial gapA gene for DNA glyceraldehide-3-phosphate, strain NCPPB 411b	NCPPB 411 T NCPPB 411 is type strain of: Xanthomonas arboricola	2010/05/13	598
FN667750	Xanthomonas arboricola pv. juglandis partial acnB gene for second aconitase, strain NCPPB 411	NCPPB 411 T NCPPB 411 is type strain of: Xanthomonas arboricola	2010/05/13	589
EU499070	Xanthomonas arboricola pv. juglandis strain ICMP 35 RNA polymerase sigma factor (rpoD) gene, partial cds	ICMP 35 T ICMP 35 is type strain of: Xanthomonas arboricola	2008/11/03	870
EU498951	Xanthomonas arboricola pv. juglandis strain ICMP 35 gyrase subunit B (gyrB) gene, partial cds	ICMP 35 T ICMP 35 is type strain of: Xanthomonas arboricola	2008/11/03	865
EU498852	Xanthomonas arboricola pv. juglandis strain ICMP 35 TonB-dependent receptor (fyuA) gene, partial cds	ICMP 35 T ICMP 35 is type strain of: Xanthomonas arboricola	2008/11/03	698
EU498750	Xanthomonas arboricola pv. juglandis strain ICMP 35 chaperone protein (dnaK) gene, partial cds	ICMP 35 T ICMP 35 is type strain of: Xanthomonas arboricola	2008/11/03	940
EU007516	Xanthomonas arboricola strain NCPPB 411 DNA gyrase B (gyrB) gene, partial cds	NCPPB 411 T NCPPB 411 is type strain of: Xanthomonas arboricola	2007/07/18	530
AF209752	Xanthomonas arboricola strain ICMP35 16S-23S ribosomal RNA intergenicspacer, complete sequence	ICMP 35 T ICMP 35 is type strain of: Xanthomonas arboricola	2001/11/21	507
Y10757	X.arboricola 16S rRNA gene	LMG 747 T LMG 747 is type strain of: Xanthomonas arboricola	1997/04/01	1502

22 items found, displaying all items.

publications

12 items found, displaying all items.


Hajri A, Pothier JF, Fischer-Le Saux M, Bonneau S, Poussier S, Boureau T, Duffy B, Manceau C Type Three Effector Gene Distribution and Sequence Analysis Provide New Insights into the Pathogenicity of Plant-Pathogenic Xanthomonas arboricola Appl Environ Microbiol 78(2), 371-384, 2012
Pothier JF, Pagani MC, Pelludat C, Ritchie DF, Duffy B A duplex-PCR method for species- and pathovar-level identification and detection of the quarantine plant pathogen Xanthomonas arboricola pv. pruni J Microbiol Methods 86(1), 21477624, 2011
Sawada H, Kunugi Y, Watauchi K, Kudo A, Sato T Bacterial spot, a new disease of grapevine (Vitis vinifera) caused by Xanthomonas arboricola Nippon Shokubutsu Byori Gakkaiho 77, 7-22, 2011
Schneider KL, Marrero G, Alvarez AM, Presting GG Classification of Plant Associated Bacteria Using RIF, a Computationally Derived DNA Marker PLoS One 6(4), e18496, 2011
Sawada H, Watauchi K, Kunugi Y Polyphasic comparison of bacterial spot pathogen of grapevine (Xanthomonas arboricola) with that of stone fruits (X. arboricola pv. pruni). Nippon Shokubutsu Byori Gakkaiho 77, 265-277, 2011
Marcelletti S, Ferrante P, Scortichini M Multilocus Sequence Typing Reveals Relevant Genetic Variation and Different Evolutionary Dynamics among Strains of Xanthomonas arboricola pv. Juglandis Diversity (Basel) 2(11), 1205-1222, 2010
Young JM, Park DC, Shearman HM, Fargier E A multilocus sequence analysis of the genus Xanthomonas Syst Appl Microbiol 31(5), 366-377, 2008
Parkinson N, Aritua V, Heeney J, Cowie C, Bew J, Stead D Phylogenetic analysis of Xanthomonas species by comparison of partial gyrase B gene sequences Int J Syst Evol Microbiol 57(12), 2881-2887, 2007
Goncalves ER, Rosato YB Phylogenetic analysis of Xanthomonas species based upon 16S-23S rDNA intergenic spacer sequences Int J Syst Evol Microbiol 52(2), 355-361, 2002
Hauben L, Vauterin L, Swings J, Moore ER Comparison of 16S ribosomal DNA sequences of all Xanthomonas species Int J Syst Bacteriol 47(2), 328-335, 1997
Vauterin L, Hoste B, Kersters K, Swings J Reclassification of Xanthomonas Int J Syst Bacteriol 45, 472-489, 1995
Dye, D W, Bradbury, J F, Goto, M, Hayward, A C, Lelliott, R A, Schroth, M N International Standards for naming pathovars of phytopathogenic bacteria and a list of pathovar names and pathotype strains Rev Plant Pathol 59, 153-168, 1980

12 items found, displaying all items.

Strain PassportNCPPB 411 Xanthomonas arboricola pv. juglandis

Strain Passport
NCPPB 411 Xanthomonas arboricola pv. juglandis