Strain Passport
HMSMYX.1.1.1 Flavobacterium johnsoniae

accession#	description	strainnumber	date	length
AB472806	Flavobacterium johnsoniae tuf gene for elongation factor Tu, partial cds, strain: JCM 8514	JCM 8514 T JCM 8514 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2009/12/10	774
EI702803	SHI-F12 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to S-adenosylmethionine:tRNA ribosyltransferase-isomerase, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	320
EI702802	SHII-H03 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to Uvs065, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	405
EI702801	SHI-E22 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to Undecaprenyl pyrophosphate synthase, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	129
EI702800	SHII-C12 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to Uncharacterized iron-regulated protein, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	765
EI702799	SHI-E10 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to UDP-N-acetylglucosamine 1-carboxyvinyltransferase, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	795
EI702798	SHII-G01 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to Two-component system sensor histidine kinase, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	339
EI702797	SHI-F05 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	312
EI702796	SHII-H12 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to transposase Tra5 related protein, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	55
EI702795	SHI-C08 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to Transketolase, N-terminal subunit, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	141
EI702794	SHII-C07 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to Transcriptional regulator, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	259
EI702793	SHII-D09 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to TPR-domain containing protein, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	375
EI702792	SHII-A06 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to TPR repeat, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	501
EI702791	SHII-A02 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to Thiamine biosynthesis protein thiC, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	444
EI702790	SHI-C12 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to TatD-related DNase, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	315
EI702789	SHII-F05 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to SprA, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	805
EI702788	SHI-C02 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to Snf2 family helicase, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	567
EI702787	SHII-B09 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to S-layer protein (SLH domain):Peptidoglycan-binding LysM, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	318
EI702786	SHI-E01 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to Sensor histidine kinase, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	585
EI702785	SHII-B08 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to RHS family protein, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	393
EI702784	SHI-B12 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to Rhs family protein, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	333
EI702783	SHII-H20 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to tyrosine-protein kinase in cps region, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	261
EI702782	SHII-F03 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to transmembrane glycosyltransferase, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	249
EI702781	SHI-E04 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to sulfatase, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	219
EI702780	SHII-H10 Flavobacterium columnare subtractive hybridization library Flavobacterium columnare genomic similar to silver efflux pump, genomic survey sequence	ATCC 17061 T ATCC 17061 is type strain of: Cytophaga johnsonae Flavobacterium johnsoniae	2008/05/01	414

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publications

27 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]


Rhodes RG, Samarasam MN, Van Groll EJ, McBride MJ Mutations in Flavobacterium johnsoniae sprE Result in Defects in Gliding Motility and Protein Secretion J Bacteriol 193(19), 5322-5327, 2011
McBride MJ, Xie G, Martens EC, Lapidus A, Henrissat B, Rhodes RG, Goltsman E, Wang W, Xu J, Hunnicutt DW, Staroscik AM, Hoover TR, Cheng YQ, Stein JL Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium johnsoniae as revealed by genome sequence analysis Appl Environ Microbiol 75(21), 6864-6875, 2009
Nelson SS, Bollampalli S, McBride MJ SprB is a cell surface component of the Flavobacterium johnsoniae gliding motility machinery J Bacteriol 190(8), 2851-2857, 2008
Olivares-Fuster O, Arias CR Use of suppressive subtractive hybridization to identify Flavobacterium columnare DNA sequences not shared with Flavobacterium johnsoniae Lett Appl Microbiol 46(6), 605-612, 2008
Nelson SS, Glocka PP, Agarwal S, Grimm DP, McBride MJ Flavobacterium johnsoniae SprA is a cell surface protein involved in gliding motility J Bacteriol 189(19), 7145-7150, 2007
Nelson SS, McBride MJ Mutations in Flavobacterium johnsoniae secDF result in defects in gliding motility and chitin utilization. J Bacteriol 188(1), 348-351, 2006
Welker TL, Shoemaker CA, Arias CR, Klesius PH Transmission and detection of Flavobacterium columnare in channel catfish Ictalurus punctatus Dis Aquat Organ 63(2-3), 129-138, 2005
Braun TF, Khubbar MK, Saffarini DA, McBride MJ Flavobacterium johnsoniae gliding motility genes identified by mariner mutagenesis J Bacteriol 187(20), 6943-6952, 2005
Naas T, Bellais S, Nordmann P Molecular and biochemical characterization of a carbapenem-hydrolysing beta-lactamase from Flavobacterium johnsoniae J Antimicrob Chemother 51(2), 267-273, 2003
Hunnicutt DW, Kempf MJ, McBride MJ Mutations in Flavobacterium johnsoniae gldF and gldG disrupt gliding motility and interfere with membrane localization of GldA J Bacteriol 184(9), 2370-2378, 2002
Hamana K, Nakagawa Y Polyamine distribution profiles in newly validated genera and species within the Flavobacterium-Flexibacter-Cytophaga-Sphingobacterium complex Microbios 106 Suppl 2, 105-116, 2001
Suzuki M, Nakagawa Y, Harayama S, Yamamoto S Phylogenetic analysis and taxonomic study of marine Cytophaga-like bacteria: proposal for Tenacibaculum gen. nov. with Tenacibaculum maritimum comb. nov. and Tenacibaculum ovolyticum comb. nov., and description of Tenacibaculum mesophilum sp. nov. and Tenacibaculum amylolyticum sp. nov Int J Syst Evol Microbiol 51(5), 1639-1652, 2001
Kempf MJ, McBride MJ Transposon insertions in the Flavobacterium johnsoniae ftsX gene disrupt gliding motility and cell division J Bacteriol 182(6), 1671-1679, 2000
Hunnicutt DW, McBride MJ Cloning and characterization of the Flavobacterium johnsoniae gliding-motility genes gldB and gldC J Bacteriol 182(4), 911-918, 2000
Agarwal S, Hunnicutt DW, McBride MJ Cloning and characterization of the Flavobacterium johnsoniae (Cytophaga johnsonae) gliding motility gene, gldA Proc Natl Acad Sci U S A 94(22), 12139-12144, 1997
Bernardet J-F, Segers P, Vancanneyt M, Berthe F, Kersters K, Vandamme P Cutting a Gordian knot: emended classification and description of the genus Flavobacterium, emended description of the family Flavobacteriaceae, and proposal of Flavobacterium hydatis nom. nov. (basonym Cytophaga aquatilis Strohl and Tait 1978) Int J Syst Bacteriol 46, 128-148, 1996
McBride MJ, Kempf MJ Development of techniques for the genetic manipulation of the gliding bacterium Cytophaga johnsonae J Bacteriol 178(3), 583-590, 1996
(Unknown) Int J Syst Bacteriol 46, 627, 1996
Nakagawa Y, Yamasato K Phylogenetic diversity of the genus Cytophaga revealed by 16S rRNA sequencing and menaquinone analysis J Gen Microbiol 139 Pt 6, 1155-1161, 1993
Gherna R, Woese CR A partial phylogenetic analysis of the "flavobacter-bacteroides" phylum: basis for taxonomic restructuring Syst Appl Microbiol 15(4), 513-521, 1992
Bernardet, J-F, Grimont, P A D Deoxyribonucleic acid relatedness and phenotypic characterization of Flexibacter columnaris sp. nov., nom. rev., Flexibacter psychrophilus sp. nov., nom rev., and Flexibacter maritimus Wakabayashi, Hikida, and Masumura 1986 Int J Syst Bacteriol 39, 346-354, 1989
Oyaizu, H, Komagata, K Chemotaxonomic and phenotypic characterization of the strains of species in the Flavobacterium-Cytophaga complex J Gen Appl Microbiol 27, 57-107, 1981
Approved Lists of Bacterial Names Int J Syst Bacteriol 30, 225-420, 1980
(Unknown) Int J Syst Bacteriol 30, 289, 1980
Mandel, M., Leadbetter, E. R. Deoxyribonucleic acid base composition of myxobacteria J Bacteriol 90, 1795-1796, 1965

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Strain PassportHMSMYX.1.1.1 Flavobacterium johnsoniae

Strain Passport
HMSMYX.1.1.1 Flavobacterium johnsoniae