Strain Passport
KCTC 2422 Bradyrhizobium japonicum

overview

species name

all known species names for this strain
*Bradyrhizobium japonicum*

type strain of

Bradyrhizobium japonicum, Rhizobium japonicum

strain numbers

3I1b6

3I1B6

Aso 6

ATCC 10324

BCRC 13518

CCRC 11091

CCRC 13518

CCTM La 3681

CCUG 27876

CECT 530

CIP 106093

DSM 30131

DSMZ 30131

Erdman 3I1b6

Erdmann L.W 3I1b6

Erdmann L.W. 3I1b6

Erdmann L.W., 3I1b6

HAMBI 2314

IAM 12608

ICMP 2864

ICMP 9301

IFO 14783

JCM 20679

KACC 10645

KCTC 2422

LMG 6138

NBRC 14783

NCIB 11477

NCIMB 11477

NRRL B-4507

NRRL L-241

NZP 5549

NZRCC 10317

OUT 30002

PDDCC 2648^T

PDDCC 2684^T

PDDCC 2864

USDA 505

USDA 6

VKM B-1967

availability map

BRC strain browser

history

This Histri was manually curated (last saved on 2008-08-21).

Histri

sequences

73 items found, displaying 1 to 25.[First/Prev] 1, 2, 3 [Next/Last]

accession#	description	strainnumber	date	length
JN686033	Bradyrhizobium japonicum USDA 6 phosphoribosylaminoimidazole-succinocarboxamide synthase (purC) gene, partial cds	USDA 6 T USDA 6 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2011/11/24	394
JN685988	Bradyrhizobium japonicum USDA 6 malate dehydrogenase (mdh) gene, partial cds	USDA 6 T USDA 6 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2011/11/24	451
JN685931	Bradyrhizobium japonicum USDA 6 acetolactate synthase (ilvI) gene, partial cds	USDA 6 T USDA 6 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2011/11/24	375
JN685876	Bradyrhizobium japonicum USDA 6 glyceraldehyde-3-phosphate dehydrogenase (gap) gene, partial cds	USDA 6 T USDA 6 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2011/11/24	446
JN685823	Bradyrhizobium japonicum USDA 6 aspartate semialdehyde dehydrogenase (asd) gene, partial cds	USDA 6 T USDA 6 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2011/11/24	434
JN685776	Bradyrhizobium japonicum USDA 6 GTP-binding membrane protein (lepA) gene, partial cds	USDA 6 T USDA 6 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2011/11/24	434
JN685727	Bradyrhizobium japonicum USDA 6 DNA topoisomerase IV subunit B (gyrB) gene, partial cds	USDA 6 T USDA 6 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2011/11/24	438
AP012206	Bradyrhizobium japonicum USDA 6 DNA, complete genome	USDA 6 T USDA 6 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2011/11/01	9207384
HQ143390	Bradyrhizobium japonicum USDA 6 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	USDA 6 T USDA 6 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2011/10/04	913
AB573867	Bradyrhizobium japonicum nodC gene for N-acetylglucosaminyltransferase, partial cds, strain: NBRC 14783	NBRC 14783 T NBRC 14783 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2011/02/03	894
AB573866	Bradyrhizobium japonicum nifH gene for nitrogenase reductase, partial cds, strain: NBRC 14783	NBRC 14783 T NBRC 14783 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2011/02/03	421
AB573865	Bradyrhizobium japonicum DNA, 16S-23S rRNA ITS region, tRNA-Ile, tRNA-Ala, strain: NBRC 14783	NBRC 14783 T NBRC 14783 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2011/02/03	815
HQ587875	Bradyrhizobium japonicum strain USDA6 glutamine synthetase isoform II (glnII) gene, partial cds	USDA 6 T USDA 6 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2010/12/13	556
HM047126	Bradyrhizobium japonicum strain LMG 6138 nitrogenase reductase (nifH) gene, partial cds	LMG 6138 T LMG 6138 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2010/06/28	720
FM213285	Bradyrhizobium japonicum partial hrcA gene for heat-inducible transcription repressor, type strain LMG 6138T	LMG 6138 T LMG 6138 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2009/07/05	615
FM213188	Bradyrhizobium japonicum partial pal gene for peptidoglycan-associated lipoprotein, type strain LMG 6138T	LMG 6138 T LMG 6138 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2009/07/05	261
FM213141	Bradyrhizobium japonicum partial rpoD gene for RNA polymerase sigma factor, type strain LMG 6138T	LMG 6138 T LMG 6138 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2009/07/05	615
AB510002	Bradyrhizobium japonicum gene for 16S ribosomal RNA, partial sequence, strain: NBRC 14783	NBRC 14783 T NBRC 14783 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2009/06/23	1414
AM168422	Bradyrhizobium japonicum partial noeE gene	USDA 6 T USDA 6 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2007/12/05	626
AB354632	Bradyrhizobium japonicum nodC gene for N-acetylglucosaminyltransferase, partial cds, strain: IAM 12608T	IAM 12608 T IAM 12608 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2007/08/28	739
EF190176	Bradyrhizobium japonicum strain DSMZ 30131 RNA polymerase beta subunit (rpoB) gene, partial cds	DSMZ 30131 T DSMZ 30131 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2007/06/01	771
AM168414	Bradyrhizobium japonicum partial noeI gene for 2-O-methyltransferase	USDA 6 T USDA 6 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2007/05/15	353
AM168394	Bradyrhizobium japonicum partial nodZ gene for fucosyltransferase	USDA 6 T USDA 6 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2007/05/15	467
AM168362	Bradyrhizobium japonicum partial dnaK gene for Hsp70 molecular chaperone	USDA 6 T USDA 6 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2007/05/15	707
AM168341	Bradyrhizobium japonicum partial recA gene for recombinase A	USDA 6 T USDA 6 is type strain of: Bradyrhizobium japonicum Rhizobium japonicum	2007/05/15	559

73 items found, displaying 1 to 25.[First/Prev] 1, 2, 3 [Next/Last]

publications

40 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]


Kaneko T, Maita S, Hirakawa H, Uchiike N, Minamisawa K, Watanabe A, Sato S Complete Genome Sequence of the Soybean Symbiont Bradyrhizobium japonicum Strain USDA6T Gene 2, 763-787, 2011
van Berkum PB, Elia P, Song Q, Eardly BD Development and application of a multilocus sequence analysis method for the identification of genotypes within the genus Bradyrhizobium and for establishing nodule occupancy of soybean (Glycine max L. Merr) Mol Plant Microbe Interact , 2011
Martens M, Dawyndt P, Coopman R, Gillis M, De Vos P, Willems A Advantages of multilocus sequence analysis for taxonomic studies: a case study using 10 housekeeping genes in the genus Ensifer (including former Sinorhizobium) Int J Syst Evol Microbiol 58(1), 200-214, 2008
Vinuesa P, Rojas-Jimenez K, Contreras-Moreira B, Mahna SK, Prasad BN, Moe H, Selvaraju SB, Thierfelder H, Werner D Multilocus sequence analysis for assessment of the biogeography and evolutionary genetics of four Bradyrhizobium species that nodulate soybeans on the asiatic continent Appl Environ Microbiol 74(22), 6987-6996, 2008
Stepkowski T, Hughes CE, Law IJ, Markiewicz L, Gurda D, Chlebicka A, Moulin L Diversification of lupine Bradyrhizobium strains: evidence from nodulation gene trees Appl Environ Microbiol 73(10), 3254-3264, 2007
Martens M, Delaere M, Coopman R, De Vos P, Gillis M, Willems A Multilocus sequence analysis of Ensifer and related taxa Int J Syst Evol Microbiol 57(3), 489-503, 2007
Sameshima-Saito R, Chiba K, Minamisawa K Correlation of Denitrifying Capability with the Existence of nap, nir, nor and nos Genes in Diverse Strains of Soybean Bradyrhizobia Microbes Environ 21, 174-184, 2006
Ormeno-Orrillo E, Vinuesa P, Zuniga-Davila D, Martinez-Romero E Molecular diversity of native bradyrhizobia isolated from Lima bean (Phaseolus lunatus L.) in Peru Syst Appl Microbiol 29(3), 253-262, 2006
Vinuesa P, Silva C, Werner D, Martinez-Romero E Population genetics and phylogenetic inference in bacterial molecular systematics: the roles of migration and recombination in Bradyrhizobium species cohesion and delineation Mol Phylogenet Evol 34(1), 29-54, 2005
Kwon SW, Park JY, Kim JS, Kang JW, Cho YH, Lim CK, Parker MA, Lee GB Phylogenetic analysis of the genera Bradyrhizobium, Mesorhizobium, Rhizobium and Sinorhizobium on the basis of 16S rRNA gene and internally transcribed spacer region sequences Int J Syst Evol Microbiol 55(1), 263-270, 2005
Saeki Y, Aimi N, Hashimoto M, Tsukamoto S, Kaneko A, Yoshida N, Nagatomo Y, Akao S Grouping of Bradyrhizobium USDA strains by Sequence Analysis of 16S rDNA and 16S-23S rDNA Internal Transcribed Spacer Region Soil Sci Plant Nutr 50, 517-525, 2004
Cantera JJ, Kawasaki H, Seki T The nitrogen-fixing gene (nifH) of Rhodopseudomonas palustris: a case of lateral gene transfer? Microbiology 150(7), 2237-2246, 2004
Nanba K, King GM, Dunfield K Analysis of facultative lithotroph distribution and diversity on volcanic deposits by use of the large subunit of ribulose 1,5-bisphosphate carboxylase/oxygenase Appl Environ Microbiol 70(4), 2245-2253, 2004
Dedysh SN, Ricke P, Liesack W NifH and NifD phylogenies: an evolutionary basis for understanding nitrogen fixation capabilities of methanotrophic bacteria Microbiology 150(5), 1301-1313, 2004
Ouattara AS, Assih EA, Thierry S, Cayol JL, Labat M, Monroy O, Macarie H Bosea minatitlanensis sp. nov., a strictly aerobic bacterium isolated from an anaerobic digester Int J Syst Evol Microbiol 53(5), 1247-1251, 2003
Khamis A, Colson P, Raoult D, Scola BL Usefulness of rpoB gene sequencing for identification of Afipia and Bosea species, including a strategy for choosing discriminative partial sequences Appl Environ Microbiol 69(11), 6740-6749, 2003
King GM Molecular and culture-based analyses of aerobic carbon monoxide oxidizer diversity Appl Environ Microbiol 69(12), 7257-7265, 2003
Sameshima R, Isawa T, Sadowsky MJ, Hamada T, Kasai H, Shutsrirung A, Mitsui H, Minamisawa K Phylogeny and distribution of extra-slow-growing Bradyrhizobium japonicum harboring high copy numbers of RSalpha, RSbeta and IS1631 FEMS Microbiol Ecol 44(2), 191-202, 2003
Parker MA, Lafay B, Burdon JJ, van Berkum P Conflicting phylogeographic patterns in rRNA and nifD indicate regionally restricted gene transfer in Bradyrhizobium Microbiology 148(8), 2557-2565, 2002
Willems A, Coopman R, Gillis M Comparison of sequence analysis of 16S-23S rDNA spacer regions, AFLP analysis and DNA-DNA hybridizations in Bradyrhizobium Int J Syst Evol Microbiol 51(2), 623-632, 2001
Tan Z, Hurek T, Vinuesa P, Muller P, Ladha JK, Reinhold-Hurek B Specific detection of Bradyrhizobium and Rhizobium strains colonizing rice (Oryza sativa) roots by 16S-23S ribosomal DNA intergenic spacer-targeted PCR Appl Environ Microbiol 67(8), 3655-3664, 2001
Young JM, Kuykendall LD, Martinez-Romero E, Kerr A, Sawada H A revision of Rhizobium Frank 1889, with an emended description of the genus, and the inclusion of all species of Agrobacterium Conn 1942 and Allorhizobium undicola de Lajudie et al. 1998 as new combinations: Rhizobium radiobacter, R. rhizogenes, R. rubi, R. undicola and R. vitis Int J Syst Evol Microbiol 51(1), 89-103, 2001
Clapp JP, Mansur I, Dodd JC, Jeffries P Ribotyping of rhizobia nodulating Acacia mangium and Paraserianthes falcataria from different geographical areas in Indonesia using PCR-RFLP-SSCP (PRS) and sequencing Environ Microbiol 3(4), 273-280, 2001
van Berkum P, Fuhrmann JJ Evolutionary relationships among the soybean bradyrhizobia reconstructed from 16S rRNA gene and internally transcribed spacer region sequence divergence Int J Syst Evol Microbiol 50 Pt 6, 2165-2172, 2000
Turner SL, Young JP The glutamine synthetases of rhizobia: phylogenetics and evolutionary implications Mol Biol Evol 17(2), 309-319, 2000

40 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

Strain PassportKCTC 2422 Bradyrhizobium japonicum

Strain Passport
KCTC 2422 Bradyrhizobium japonicum