Strain Passport
NCCB 71013 Vibrio alginolyticus

overview

species name

all known species names for this strain
*Vibrio alginolyticus*

type strain of

Beneckea alginolytica, Vibrio alginolyticus

16S Sequence

X56576

strain numbers

118

ATCC 17749

Baumann 118

BCRC 12829

CAIM 516

CCM 2578

CCRC 12829

CCUG 13445

CCUG 16315

CCUG 4989

CDC 9065-79

CECT 521

CECT 587

CGMCC 1.1833

CIP 103336

CIP 75.03

CIP 75.3

DSM 2171

DSMZ 2171

HUFP 9107

IFO 15630

IMET 11295

KCTC 2472

Lee MV2204

LeeMV2204

LMD 71.13

LMD 77.3

LMG 4408

LMG 4409

Miyamoto XII-53

NBRC 15630

NCCB 71013

NCCB 77003

NCIMB 1903

NCMB 1903

NCTC 12160

NCTC CL241/82

P. Baumann 118

RIMD 2201001

USCC 2241

Verdonck VIB 283

VIB 283

XII-53

Y. Miyamoto XII-53

availability map

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history

This Histri was manually curated (last saved on 2012-03-14).

Histri

sequences

41 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

accession#	description	strainnumber	date	length
HM771350	Vibrio alginolyticus 16S ribosomal RNA gene, partial sequence	ATCC 17749 T ATCC 17749 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2010/09/28	1471
EU546135	Vibrio alginolyticus strain CECT 521 clone VA2 heat-shock protein DnaJ (dnaJ) gene, partial cds	CECT 521 T CECT 521 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2010/09/27	104
EU546134	Vibrio alginolyticus strain CECT 521 clone VA1 heat-shock protein DnaJ (dnaJ) gene, partial cds	CECT 521 T CECT 521 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2010/09/27	104
GU266285	Vibrio alginolyticus strain LMG 4409 urydilate kinase (pyrH) gene, partial cds	LMG 4409 T LMG 4409 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2010/07/19	591
FN423802	Vibrio alginolyticus partial rpoB gene for RNA polymerase beta subunit, strain ATCC 17749	ATCC 17749 T ATCC 17749 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2010/06/21	871
EU155543	Vibrio alginolyticus strain ATCC 17749 ToxR (toxR) gene, partial cds	ATCC 17749 T ATCC 17749 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2009/12/10	533
EU155488	Vibrio alginolyticus strain ATCC 17749 16S ribosomal RNA (rrs) gene, partial sequence	ATCC 17749 T ATCC 17749 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2009/12/10	892
GQ292538	Vibrio alginolyticus strain VIB283 thermolabile hemolysin gene, partial cds	VIB 283 T VIB 283 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2009/07/27	1174
EF027344	Vibrio alginolyticus strain LMG 4409 cell division FtsZ protein (ftsZ) gene, partial cds	LMG 4409 T LMG 4409 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2008/12/30	514
FJ457036	Vibrio alginolyticus strain ATCC 17749 hemolysin gene, partial cds	ATCC 17749 T ATCC 17749 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2008/12/29	360
FM204831	Vibrio alginolyticus partial recA gene for replication-repair protein, culture collection CECT 521T	CECT 521 T CECT 521 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2008/11/26	795
FM202715	Vibrio alginolyticus partial toxR gene for transmembrane regulatory protein, culture collection CECT 521T	CECT 521 T CECT 521 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2008/11/26	555
FM202662	Vibrio alginolyticus partial rctB gene for replication origin-binding protein, culture collection CECT 521T	CECT 521 T CECT 521 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2008/11/26	591
FM202620	Vibrio alginolyticus partial gyrB gene for gyrase B subunit, culture collection CECT 521T	CECT 521 T CECT 521 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2008/11/26	1047
FM202578	Vibrio alginolyticus partial pyrH gene for uridilate kinase, culture collection CECT 521T	CECT 521 T CECT 521 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2008/11/26	601
FM202535	Vibrio alginolyticus partial rpoD gene for RNA polymerase sigma factor, culture collection CECT 521T	CECT 521 T CECT 521 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2008/11/26	813
FJ377705	Vibrio alginolyticus strain LMG 4409 CgtA (cgtA) gene, partial cds	LMG 4409 T LMG 4409 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2008/11/10	1036
AB372523	Vibrio alginolyticus DNA, similar to toxR, toxS genes sequence, strain: ATCC 17749	ATCC 17749 T ATCC 17749 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2008/06/19	1252
EU680781	Vibrio alginolyticus strain ATCC 17749 DNA gyrase subunit B (gyrB) gene, partial cds	ATCC 17749 T ATCC 17749 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2008/05/20	2336
AB298202	Vibrio alginolyticus gyrB gene for gyrase B subunit, partial cds	ATCC 17749 T ATCC 17749 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2008/01/05	814
DQ907472	Vibrio alginolyticus strain LMG4409 topoisomerase I (topA) gene, partial cds	LMG 4409 T LMG 4409 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2008/01/01	684
DQ907405	Vibrio alginolyticus strain LMG4409 rod shaping protein MreB (mreB) gene, partial cds	LMG 4409 T LMG 4409 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2008/01/01	911
DQ907274	Vibrio alginolyticus strain LMG4409 glyceraldehyde-3-phosphate dehydrogenase (gapA) gene, partial cds	LMG 4409 T LMG 4409 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2008/01/01	873
EF601231	Vibrio alginolyticus strain LMG 4409 ATPase (atpA) gene, partial cds	LMG 4409 T LMG 4409 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2007/11/09	1322
EU224457	Vibrio alginolyticus strain VIB283 RpoS (rpoS) gene, complete cds	VIB 283 T VIB 283 is type strain of: Beneckea alginolytica Vibrio alginolyticus	2007/11/06	1174

41 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

publications

30 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]


Hoffmann M, Monday SR, Allard MW, Strain EA, Whittaker P, Naum M, McCarthy PJ, Lopez JV, Fischer M, Brown EW Vibrio caribbeanicus sp. nov., isolated from marine sponge Scleritoderma cyanea Int J Syst Evol Microbiol 62(8), 21930677, 2011
Chimetto LA, Cleenwerck I, Alves N Jr, Silva BS, Brocchi M, Willems A, De Vos P, Thompson FL Vibrio communis sp. nov. isolated from marine animals (Mussismilia hispida, Phyllogorgia dilatata, Palythoa caribaeorum, Palythoa variabilis and Litopenaeus vannamei) Int J Syst Evol Microbiol 61, 362-368, 2011
Dieckmann R, Strauch E, Alter T Rapid identification and character ization of Vibrio species using whole-cell MALDI-TOF mass spectrometry J Appl Microbiol 109, 199-211, 2010
Pascual J, Macian MC, Arahal DR, Garay E, Pujalte MJ Multilocus sequence analysis of the central clade of the genus Vibrio by using the 16S rRNA, recA, pyrH, rpoD, gyrB, rctB and toxR genes Int J Syst Evol Microbiol 60(1), 154-165, 2010
Espineira M, Atanassova M, Vieites JM, Santaclara FJ Validation of a method for the detection of five species, serogroups, biotypes and virulence factors of Vibrio by multiplex PCR in fish and seafood Food Microbiol 27(1), 122-131, 2010
Miyahara M, Arakawa E Studies on the Rapid Detection of Vibrio parahaemolyticus in Food (misc) Bokin Bobai 36, 669-675, 2008
Thompson CC, Thompson FL, Vicente AC, Swings J Phylogenetic analysis of vibrios and related species by means of atpA gene sequences Int J Syst Evol Microbiol 57(11), 2480-2484, 2007
Brown DW, Cheung F, Proctor RH, Butchko RA, Zheng L, Lee Y, Utterback T, Smith S, Feldblyum T, Glenn AE, Plattner RD, Kendra DF, Town CD, Whitelaw CA Comparative analysis of 87,000 expressed sequence tags from the fumonisin-producing fungus Fusarium verticillioides Fungal Genet Biol 42(10), 848-861, 2005
Thompson FL, Gevers D, Thompson CC, Dawyndt P, Naser S, Hoste B, Munn CB, Swings J Phylogeny and molecular identification of vibrios on the basis of multilocus sequence analysis Appl Environ Microbiol 71(9), 5107-5115, 2005
Thompson FL, Thompson CC, Naser S, Hoste B, Vandemeulebroecke K, Munn C, Bourne D, Swings J Photobacterium rosenbergii sp. nov. and Enterovibrio coralii sp. nov., vibrios associated with coral bleaching Int J Syst Evol Microbiol 55(2), 913-917, 2005
Gyllenberg M, Koski T, Dawyndt P, Lund T, Thompson F, Austin B, Swings J New methods for the analysis of binarized BIOLOG GN data of Vibrio species: minimization of stochastic complexity and cumulative classification Syst Appl Microbiol 25(3), 403-415, 2002
Kwok AY, Wilson JT, Coulthart M, Ng LK, Mutharia L, Chow AW Phylogenetic study and identification of human pathogenic Vibrio species based on partial hsp60 gene sequences Can J Microbiol 48(10), 903-910, 2002
Maeda T, Furushita M, Hamamura K, Shiba T Structures of ribonuclease P RNAs of Vibrio core species FEMS Microbiol Lett 198(2), 141-146, 2001
Venkateswaran K, Dohmoto N, Harayama S Cloning and nucleotide sequence of the gyrB gene of Vibrio parahaemolyticus and its application in detection of this pathogen in shrimp Appl Environ Microbiol 64(2), 681-687, 1998
Ishimaru, K, Akagawa-Matsushita, M, Muroga, K Vibrio penaeicida sp. nov., a pathogen of Kuruma prawns (Penaeus japonicus) Int J Syst Bacteriol 45, 134-138, 1995
(Unknown) Int J Syst Bacteriol 45, 423, 1995
Ruimy R, Breittmayer V, Elbaze P, Lafay B, Boussemart O, Gauthier M, Christen R Phylogenetic analysis and assessment of the genera Vibrio, Photobacterium, Aeromonas, and Plesiomonas deduced from small-subunit rRNA sequences Int J Syst Bacteriol 44(3), 416-426, 1994
Yamamoto S, Sugahara T, Tougou K, Shinoda S Cloning and nucleotide sequence of the carboxynorspermidine decarboxylase gene from Vibrio alginolyticus Microbiology 140 ( Pt 11), 3117-3124, 1994
Kita-Tsukamoto K, Oyaizu H, Nanba K, Simidu U Phylogenetic relationships of marine bacteria, mainly members of the family Vibrionaceae, determined on the basis of 16S rRNA sequences Int J Syst Bacteriol 43(1), 8-19, 1993
Dorsch M, Lane D, Stackebrandt E Towards a phylogeny of the genus Vibrio based on 16S rRNA sequences Int J Syst Bacteriol 42(1), 58-63, 1992
MacDonell, M T, Colwell, R R Phylogeny of the Vibrionaceae, and recommendation for two new genera, Listonella and Shewanella Syst Appl Microbiol 6, 171-182, 1985
(Unknown) Int J Syst Bacteriol 30, 417, 1980
Baumann, P, Baumann, L, Bang, S S, Woolkalis, M J Reevaluation of the taxonomy of Vibrio, Beneckea, and Photobacterium: abolition of the genus Beneckea Curr Microbiol 4, 127-132, 1980
Approved Lists of Bacterial Names Int J Syst Bacteriol 30, 225-420, 1980
Allen RD, Baumann P Structure and arrangement of flagella in species of the genus Beneckea and Photobacterium fischeri J Bacteriol 107(1), 295-302, 1971

30 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

Strain PassportNCCB 71013 Vibrio alginolyticus

Strain Passport
NCCB 71013 Vibrio alginolyticus