Strain Passport
NCIMB 10682 Clostridium thermocellum

overview

species name

all known species names for this strain
*Clostridium thermocellum*

type strain of

Clostridium thermocellum

16S Sequence

CP000568

strain numbers

157

ATCC 27405

BCRC 14411

CCRC 14411

CCTM La 2956

CECT 593

DSM 1237

DSMZ 1237

IAM 13660

JCM 12338

JCM 9322

KCTC 1672

LMG 10435

NBRC 103400

NCIB 10682

NCIMB 10682

NRRL B-4536

VPI 7372

VTT E-81137

availability map

strain browser

SeqRank

history

This Histri was manually curated (last saved on 2010-02-16).

Histri

sequences

849 items found, displaying 1 to 25.[First/Prev] 1, 2, 3, 4, 5, 6, 7, 8 [Next/Last]

accession#	description	strainnumber	date	length
JC295716	Sequence 160 from Patent WO2013114363	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2014/02/05	177
HG787888	TPA: Clostridium thermocellum ATCC 27405 transfer-messenger mRNA Clost_therm_27405, single chain mature transcript	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2013/11/22	387
HG323497	TPA: Clostridium thermocellum ATCC 27405 SRP RNA for signal recognition particle RNA	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2013/07/04	175
HV929515	JP 2010516296-A/183: ENZYMES FOR THE TREATMENT OF LIGNOCELLULOSICS,NUCLEIC ACIDS ENCODING THEM AND METHODS FOR MAKING AND USING THEM	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2012/11/15	1401
HV929514	JP 2010516296-A/182: ENZYMES FOR THE TREATMENT OF LIGNOCELLULOSICS,NUCLEIC ACIDS ENCODING THEM AND METHODS FOR MAKING AND USING THEM	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2012/11/15	1455
HV929513	JP 2010516296-A/181: ENZYMES FOR THE TREATMENT OF LIGNOCELLULOSICS,NUCLEIC ACIDS ENCODING THEM AND METHODS FOR MAKING AND USING THEM	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2012/11/15	2220
HV929377	JP 2010516296-A/45: ENZYMES FOR THE TREATMENT OF LIGNOCELLULOSICS,NUCLEIC ACIDS ENCODING THEM AND METHODS FOR MAKING AND USING THEM	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2012/11/15	2484
HV929351	JP 2010516296-A/19: ENZYMES FOR THE TREATMENT OF LIGNOCELLULOSICS,NUCLEIC ACIDS ENCODING THEM AND METHODS FOR MAKING AND USING THEM	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2012/11/15	2226
HE663165	Clostridium thermocellum sig24C-rsi24C operon, strain ATCC 27405	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2012/02/14	7198
HE663164	Clostridium thermocellum sigI6-rsgI6 operon, strain ATCC 27405	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2012/02/14	3279
HE663163	Clostridium thermocellum sigI1-rsgI1 operon, strain ATCC 27405	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2012/02/14	2500
HV037169	JP 2011504370-A/8: PRODUCTION OF PERACIDS USING AN ENZYME HAVING PERHYDROLYSIS ACTIVITY	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2011/06/30	963
HH769608	Sequence 5795 from Patent EP2221382	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2010/11/10	615
FW367088	PRODUCTION OF PERACIDS USING AN ENZYME HAVING PERHYDROLYSIS ACTIVITY	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2010/09/07	963
HD029909	Sequence 105174 from Patent EP2199304	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2010/07/13	228
HD026804	Sequence 102069 from Patent EP2199304	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2010/07/13	1182
HD025785	Sequence 101050 from Patent EP2199304	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2010/07/13	954
HD023167	Sequence 98432 from Patent EP2199304	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2010/07/13	885
HD022658	Sequence 97923 from Patent EP2199304	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2010/07/13	1254
HD022656	Sequence 97921 from Patent EP2199304	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2010/07/13	1137
HD021328	Sequence 96593 from Patent EP2199304	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2010/07/13	756
HD020928	Sequence 96193 from Patent EP2199304	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2010/07/13	1065
HD020926	Sequence 96191 from Patent EP2199304	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2010/07/13	1044
HD019860	Sequence 95125 from Patent EP2199304	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2010/07/13	969
HD019491	Sequence 94756 from Patent EP2199304	ATCC 27405 T ATCC 27405 is type strain of: Clostridium thermocellum	2010/07/13	1452

849 items found, displaying 1 to 25.[First/Prev] 1, 2, 3, 4, 5, 6, 7, 8 [Next/Last]

publications

36 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]


Wilson CM, Rodriguez M Jr, Johnson CM, Martin SL, Chu TM, Wolfinger RD, Hauser LJ, Land ML, Klingeman DM, Syed MH, Ragauskas AJ, Tschaplinski TJ, Mielenz JR, Brown SD Global transcriptome analysis of Clostridium thermocellum ATCC 27405 during growth on dilute acid pretreated Populus and switchgrass Biotechnol Biofuels 6(1), 179, 2013
Bahari L, Gilad Y, Borovok I, Kahel-Raifer H, Dassa B, Nataf Y, Shoham Y, Lamed R, Bayer EA Glycoside hydrolases as components of putative carbohydrate biosensor proteins in Clostridium thermocellum J Ind Microbiol Biotechnol 38(7), 825-832, 2011
Nataf Y, Bahari L, Kahel-Raifer H, Borovok I, Lamed R, Bayer EA, Sonenshein AL, Shoham Y Clostridium thermocellum cellulosomal genes are regulated by extracytoplasmic polysaccharides via alternative sigma factors Proc Natl Acad Sci U S A 107(43), 18646-18651, 2010
Stajich JE, Wilke SK, Ahren D, Au CH, Birren BW, Borodovsky M, Burns C, Canback B, Casselton LA, Cheng CK, Deng J, Dietrich FS, Fargo DC, Farman ML, Gathman AC, Goldberg J, Guigo R, Hoegger PJ, Hooker JB, Huggins A, James TY, Kamada T, Kilaru S, Kodira C, Kues U, Kupfer D, Kwan HS, Lomsadze A, Li W, Lilly WW, Ma LJ, Mackey AJ, Manning G, Martin F, Muraguchi H, Natvig DO, Palmerini H, Ramesh MA, Rehmeyer CJ, Roe BA, Shenoy N, Stanke M, Ter-Hovhannisyan V, Tunlid A, Velagapudi R, Vision TJ, Zeng Q, Zolan ME, Pukkila PJ Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus) Proc Natl Acad Sci U S A 107(26), 11889-11894, 2010
Kahel-Raifer H, Jindou S, Bahari L, Nataf Y, Shoham Y, Bayer EA, Borovok I, Lamed R The unique set of putative membrane-associated anti-sigma factors in Clostridium thermocellum suggests a novel extracellular carbohydrate-sensing mechanism involved in gene regulation FEMS Microbiol Lett 308(1), 84-93, 2010
Rosenblad MA, Larsen N, Samuelsson T, Zwieb C Kinship in the SRP RNA family RNA Biol 6(5), 508-516, 2009
Zverlov VV, Klupp M, Krauss J, Schwarz WH Mutations in the scaffoldin gene, cipA, of Clostridium thermocellum with impaired cellulosome formation and cellulose hydrolysis: insertions of a new transposable element, IS1447, and implications for cellulase synergism on crystalline cellulose J Bacteriol 190(12), 4321-4327, 2008
Andersen ES, Rosenblad MA, Larsen N, Westergaard JC, Burks J, Wower IK, Wower J, Gorodkin J, Samuelsson T, Zwieb C The tmRDB and SRPDB resources Nucleic Acids Res 34(Databaseissue), D163-D168, 2006
Gueneau de Novoa P, Williams KP The tmRNA website: reductive evolution of tmRNA in plastids and other endosymbionts Nucleic Acids Res 32(Databaseissue), D104-D108, 2004
Fuchs KP, Zverlov VV, Velikodvorskaya GA, Lottspeich F, Schwarz WH Lic16A of Clostridium thermocellum, a non-cellulosomal, highly complex endo-beta-1,3-glucanase bound to the outer cell surface Microbiology 149(4), 1021-1031, 2003
Zverlov VV, Fuchs KP, Schwarz WH Chi18A, the endochitinase in the cellulosome of the thermophilic, cellulolytic bacterium Clostridium thermocellum Appl Environ Microbiol 68(6), 3176-3179, 2002
Chambergo FS, Bonaccorsi ED, Ferreira AJ, Ramos AS, Ferreira Junior JR, Abrahao-Neto J, Farah JP, El-Dorry H Elucidation of the metabolic fate of glucose in the filamentous fungus Trichoderma reesei using expressed sequence tag (EST) analysis and cDNA microarrays J Biol Chem 277(16), 13983-13988, 2002
Lemaire M, Miras I, Gounon P, Beguin P Identification of a region responsible for binding to the cell wall within the S-layer protein of Clostridium thermocellum Microbiology 144 ( Pt 1), 211-217, 1998
Kawaguchi T, Ikeuchi Y, Tsutsumi N, Kan A, Sumitani J, Arai M Cloning, nucleotide sequence, and expression of the Clostridium thermocellum cellodextrin phosphorylase gene and its application to synthesis of cellulase inhibitors J Ferment Bioeng 85, 144-149, 1998
Ciruela A, Cross S, Freedman RB, Hazlewood GP Sequence and transcriptional analysis of groES and groEL genes from the thermophilic bacterium Clostridium thermocellum Gene 186(1), 143-147, 1997
Cross SJ, Ciruela A, Poomputsa K, Romaniec MP, Freedman RB Thermostable chaperonin from Clostridium thermocellum Biochem J 316 ( Pt 2), 615-622, 1996
Leibovitz E, Beguin P A new type of cohesin domain that specifically binds the dockerin domain of the Clostridium thermocellum cellulosome-integrating protein CipA J Bacteriol 178(11), 3077-3084, 1996
Lemaire M, Beguin P Nucleotide sequence of the celG gene of Clostridium thermocellum and characterization of its product, endoglucanase CelG J Bacteriol 175(11), 3353-3360, 1993
Fujino T, Beguin P, Aubert JP Organization of a Clostridium thermocellum gene cluster encoding the cellulosomal scaffolding protein CipA and a protein possibly involved in attachment of the cellulosome to the cell surface J Bacteriol 175(7), 1891-1899, 1993
Rainey FA, Ward NL, Morgan HW, Toalster R, Stackebrandt E Phylogenetic analysis of anaerobic thermophilic bacteria: aid for their reclassification J Bacteriol 175(15), 4772-4779, 1993
Hazlewood GP, Davidson K, Laurie JI, Huskisson NS, Gilbert HJ Gene sequence and properties of CelI, a family E endoglucanase from Clostridium thermocellum J Gen Microbiol 139(2), 307-316, 1993
Fujino T, Beguin P, Aubert JP Cloning of a Clostridium thermocellum DNA fragment encoding polypeptides that bind the catalytic components of the cellulosome FEMS Microbiol Lett 94, 165-170, 1992
Fujino T, Beguin P, Aubert JP Cloning of a Clostridium thermocellum DNA fragment encoding polypeptides that bind the catalytic components of the cellulosome FEMS Microbiol Lett 73(1-2), 165-170, 1992
Schimming S, Schwarz WH, Staudenbauer WL Structure of the Clostridium thermocellum gene licB and the encoded beta-1,3-1,4-glucanase. A catalytic region homologous to Bacillus lichenases joined to the reiterated domain of clostridial cellulases Eur J Biochem 204(1), 13-19, 1992
Grabnitz F, Seiss M, Rucknagel KP, Staudenbauer WL Structure of the beta-glucosidase gene bglA of Clostridium thermocellum. Sequence analysis reveals a superfamily of cellulases and beta-glycosidases including human lactase/phlorizin hydrolase Eur J Biochem 200(2), 301-309, 1991

36 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

Strain PassportNCIMB 10682 Clostridium thermocellum

Strain Passport
NCIMB 10682 Clostridium thermocellum