Strain Passport
CCT 4063 Rhizobium loti

accession#	description	strainnumber	date	length
HQ438232	Mesorhizobium loti strain LMG6125 DNA gyrase subunit B (gyrB) gene, partial cds	LMG 6125 T LMG 6125 is type strain of: Mesorhizobium loti Rhizobium loti	2011/04/04	1100
GQ847935	Mesorhizobium loti strain HAMBI 1129 DNA gyrase subunit beta-like (gyrB) gene, partial sequence	HAMBI 1129 T HAMBI 1129 is type strain of: Mesorhizobium loti Rhizobium loti	2009/10/13	654
GQ167257	Mesorhizobium loti strain NZP 2213 NodD (nodD) gene, partial cds	NZP 2213 T NZP 2213 is type strain of: Mesorhizobium loti Rhizobium loti	2009/07/15	743
FM213283	Mesorhizobium loti partial hrcA gene for heat-inducible transcription repressor, type strain LMG 6125T	LMG 6125 T LMG 6125 is type strain of: Mesorhizobium loti Rhizobium loti	2009/07/05	618
FM213234	Mesorhizobium loti partial ribonuclease P RNA (rnpB gene), type strain LMG 6125T	LMG 6125 T LMG 6125 is type strain of: Mesorhizobium loti Rhizobium loti	2009/07/05	299
FM213185	Mesorhizobium loti partial pal gene for peptidoglycan-associated lipoprotein, type strain LMG 6125T	LMG 6125 T LMG 6125 is type strain of: Mesorhizobium loti Rhizobium loti	2009/07/05	261
FM213140	Mesorhizobium loti partial rpoD gene for RNA polymerase sigma factor, type strain LMG 6125T	LMG 6125 T LMG 6125 is type strain of: Mesorhizobium loti Rhizobium loti	2009/07/05	606
FJ393277	Mesorhizobium loti strain NZP 2213 RNA polymerase beta subunit (rpoB) gene, partial cds	NZP 2213 T NZP 2213 is type strain of: Mesorhizobium loti Rhizobium loti	2008/11/12	1398
EU039875	Mesorhizobium loti strain LMG 6125 recombination protein (recA) gene, partial cds	LMG 6125 T LMG 6125 is type strain of: Mesorhizobium loti Rhizobium loti	2008/08/29	429
EU039868	Mesorhizobium loti strain LMG 6125 ATP synthase beta subunit gene, partial cds	LMG 6125 T LMG 6125 is type strain of: Mesorhizobium loti Rhizobium loti	2008/08/29	441
EU273813	Mesorhizobium loti strain LMG 6125 50S ribosomal protein L2 (rplB) gene, partial cds	LMG 6125 T LMG 6125 is type strain of: Mesorhizobium loti Rhizobium loti	2008/08/27	417
EU273810	Mesorhizobium loti strain LMG 6125 DNA gyrase subunit B (gyrB) gene, partial cds	LMG 6125 T LMG 6125 is type strain of: Mesorhizobium loti Rhizobium loti	2008/08/27	492
EU273807	Mesorhizobium loti strain LMG 6125 glyceraldehyde-3-phosphate dehydrogenase (gapA) gene, partial cds	LMG 6125 T LMG 6125 is type strain of: Mesorhizobium loti Rhizobium loti	2008/08/27	549
EU053202	Mesorhizobium loti strain LMG 6125 DnaJ gene, partial cds	LMG 6125 T LMG 6125 is type strain of: Mesorhizobium loti Rhizobium loti	2008/08/27	703
AM946552	Mesorhizobium loti partial atpD gene for ATP synthase beta subunit, type strain LMG 6125T	LMG 6125 T LMG 6125 is type strain of: Mesorhizobium loti Rhizobium loti	2008/06/28	427
EU402443	Mesorhizobium loti strain NZP2213 autoinducer synthase (mrlI2) gene, complete cds	NZP 2213 T NZP 2213 is type strain of: Mesorhizobium loti Rhizobium loti	2008/02/13	681
EU402442	Mesorhizobium loti strain NZP2213 transcriptional regulator (mrlR3) and conjugation factor synthase (mrlI3) genes, complete cds	NZP 2213 T NZP 2213 is type strain of: Mesorhizobium loti Rhizobium loti	2008/02/13	1465
EU402441	Mesorhizobium loti strain NZP2213 transcriptional regulator (mrlR1) and autoinducer synthase (mrlI1) genes, complete cds	NZP 2213 T NZP 2213 is type strain of: Mesorhizobium loti Rhizobium loti	2008/02/13	1467
DQ450939	Mesorhizobium loti isolate NZP 2213 chitin synthase (nodC) gene, partial cds	NZP 2213 T NZP 2213 is type strain of: Mesorhizobium loti Rhizobium loti	2008/01/01	676
DQ450929	Mesorhizobium loti isolate NZP 2213 dinitrogenase reductase (nifH) gene, partial cds	NZP 2213 T NZP 2213 is type strain of: Mesorhizobium loti Rhizobium loti	2008/01/01	562
EF028004	Mesorhizobium loti strain USDA 3471 DNA gyrase subunit A (gyrA) gene, partial cds	USDA 3471 T USDA 3471 is type strain of: Mesorhizobium loti Rhizobium loti	2007/06/01	528
EF027936	Mesorhizobium loti strain USDA 3471 DNA-directed RNA polymerase beta chain (rpoB) gene, partial cds	USDA 3471 T USDA 3471 is type strain of: Mesorhizobium loti Rhizobium loti	2007/06/01	672
AM114756	Mesorhizobium loti partial dnaB gene for DNA helicase, strain LMG 6125	LMG 6125 T LMG 6125 is type strain of: Mesorhizobium loti Rhizobium loti	2006/10/21	467
AM114744	Mesorhizobium loti partial idhA gene for myo-inositol dehydrogenase, strain LMG 6125	LMG 6125 T LMG 6125 is type strain of: Mesorhizobium loti Rhizobium loti	2006/10/21	669
AM114729	Mesorhizobium loti partial pykA gene for pyruvate kinase, strain LMG 6125	LMG 6125 T LMG 6125 is type strain of: Mesorhizobium loti Rhizobium loti	2006/10/21	792

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publications

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Degefu T, Woldemeskel E, Frostegard A Multilocus sequence analyses reveal several unnamed Mesorhizobium genospecies nodulating Acacia species and Sesbania sesban trees in Southern regions of Ethiopia Syst Appl Microbiol 34(3), 216-226, 2011
Yang M, Sun K, Zhou L, Yang R, Zhong Z, Zhu J Functional analysis of three AHL autoinducer synthase genes in Mesorhizobium loti reveals the important role of quorum sensing in symbiotic nodulation Can J Microbiol 55(2), 210-214, 2009
Laranjo M, Alexandre A, Rivas R, Velazquez E, Young JP, Oliveira S Chickpea rhizobia symbiosis genes are highly conserved across multiple Mesorhizobium species FEMS Microbiol Ecol 66(2), 391-400, 2008
Alexandre A, Laranjo M, Young JP, Oliveira S dnaJ is a useful phylogenetic marker for alphaproteobacteria Int J Syst Evol Microbiol 58(12), 2839-2849, 2008
Martens M, Delaere M, Coopman R, De Vos P, Gillis M, Willems A Multilocus sequence analysis of Ensifer and related taxa Int J Syst Evol Microbiol 57(3), 489-503, 2007
Eardly BD, Nour SM, van Berkum P, Selander RK Rhizobial 16S rRNA and dnaK genes: mosaicism and the uncertain phylogenetic placement of Rhizobium galegae Appl Environ Microbiol 71(3), 1328-1335, 2005
Kwon SW, Park JY, Kim JS, Kang JW, Cho YH, Lim CK, Parker MA, Lee GB Phylogenetic analysis of the genera Bradyrhizobium, Mesorhizobium, Rhizobium and Sinorhizobium on the basis of 16S rRNA gene and internally transcribed spacer region sequences Int J Syst Evol Microbiol 55(1), 263-270, 2005
van Berkum P, Terefework Z, Paulin L, Suomalainen S, Lindstrom K, Eardly BD Discordant phylogenies within the rrn loci of Rhizobia J Bacteriol 185(10), 2988-2998, 2003
Sy A, Giraud E, Jourand P, Garcia N, Willems A, de Lajudie P, Prin Y, Neyra M, Gillis M, Boivin-Masson C, Dreyfus B Methylotrophic Methylobacterium bacteria nodulate and fix nitrogen in symbiosis with legumes J Bacteriol 183(1), 214-220, 2001
Young JM, Kuykendall LD, Martinez-Romero E, Kerr A, Sawada H A revision of Rhizobium Frank 1889, with an emended description of the genus, and the inclusion of all species of Agrobacterium Conn 1942 and Allorhizobium undicola de Lajudie et al. 1998 as new combinations: Rhizobium radiobacter, R. rhizogenes, R. rubi, R. undicola and R. vitis Int J Syst Evol Microbiol 51(1), 89-103, 2001
Willems A, Hoste B, Tang J, Janssens D, Gillis M Differences between subcultures of the Mesorhizobium loti type strain from different culture collections Syst Appl Microbiol 24(4), 549-553, 2001
Gaunt MW, Turner SL, Rigottier-Gois L, Lloyd-Macgilp SA, Young JP Phylogenies of atpD and recA support the small subunit rRNA-based classification of rhizobia Int J Syst Evol Microbiol 51(6), 2037-2048, 2001
Turner SL, Young JP The glutamine synthetases of rhizobia: phylogenetics and evolutionary implications Mol Biol Evol 17(2), 309-319, 2000
Jarvis, BDW, van Berkum, P, Chen, WX, Nour, SM, Fernández, MP, Cleyet-Marel, JC, Gillis, M Transfer of Rhizobium loti, Rhizobium huakuii, Rhizobium ciceri, Rhizobium mediterraneum, and Rhizobium tianshanense to Mesorhizobium gen. nov Int J Syst Bacteriol 47, 895-898, 1997
Scott DB, Young CA, Collins-Emerson JM, Terzaghi EA, Rockman ES, Lewis PE, Pankhurst CE Novel and complex chromosomal arrangement of Rhizobium loti nodulation genes Mol Plant Microbe Interact 9(3), 187-197, 1996
Oyaizu H, Matsumoto S, Minamisawa K, Gamou T Distribution of Rhizobia in leguminous plants surveyed by phylogenetic identification J Gen Appl Microbiol 39, 339-354, 1993
Yanagi M, Yamasato K Phylogenetic analysis of the family Rhizobiaceae and related bacteria by sequencing of 16S rRNA gene using PCR and DNA sequencer FEMS Microbiol Lett 107(1), 115-120, 1993
Willems A, Collins MD Phylogenetic analysis of rhizobia and agrobacteria based on 16S rRNA gene sequences Int J Syst Bacteriol 43(2), 305-313, 1993
Sawada H, Ieki H, Oyaizu H, Matsumoto S Proposal for rejection of Agrobacterium tumefaciens and revised descriptions for the genus Agrobacterium and for Agrobacterium radiobacter and Agrobacterium rhizogenes Int J Syst Bacteriol 43(4), 694-702, 1993
Young C, Collins-Emerson JM, Terzaghi EA, Scott DB Nucleotide sequence of Rhizobium loti nodI Nucleic Acids Res 18(22), 6691, 1990
Malik, K A A new freeze-drying method for the preservation of nitrogen-fixing and other fragile bacteria J Microbiol Methods 8, 259-271, 1988
Jarvis, B D W, Pankhurst, C E, Patel, J J Rhizobium loti, a new species of legume root bacteria Int J Syst Bacteriol 32, 378-380, 1982

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Strain PassportCCT 4063 Rhizobium loti

Strain Passport
CCT 4063 Rhizobium loti