Strain Passport
HAMBI 1726 Photobacterium phosphoreum

overview

species name

all known species names for this strain
*Photobacterium phosphoreum*

type strain of

Photobacterium phosphoreum

16S Sequence

D25310

strain numbers

ATCC 11040

Baumann 439

BCRC 13804

CAIM 328

CCRC 13804

CECT 4192

CIP 102511

CIP 75.09

DSM 15556

HAMBI 1726

IAM 14401

JCM 21184

KCTC 12377

LMG 4233

NBRC 103031

NCIMB 1282

NCMB 1282

strain Johnson

strain Kluyver

availability map

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history

This Histri was manually curated (last saved on 2012-02-17).

Histri

sequences

33 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

accession#	description	strainnumber	date	length
AB298195	Photobacterium phosphoreum gyrB gene for gyrase B subunit, partial cds	IAM 14401 T IAM 14401 is type strain of: Photobacterium phosphoreum	2008/01/05	848
DQ907465	Photobacterium phosphoreum strain IAM14401 topoisomerase I (topA) gene, partial cds	IAM 14401 T IAM 14401 is type strain of: Photobacterium phosphoreum	2008/01/01	640
DQ907393	Photobacterium phosphoreum strain IAM14401 rod shaping protein MreB (mreB) gene, partial cds	IAM 14401 T IAM 14401 is type strain of: Photobacterium phosphoreum	2008/01/01	914
DQ907326	Photobacterium phosphoreum strain IAM14401 FtsZ (ftsZ) gene, partial cds	IAM 14401 T IAM 14401 is type strain of: Photobacterium phosphoreum	2008/01/01	677
DQ907265	Photobacterium phosphoreum strain IAM14401 glyceraldehyde-3-phosphate dehydrogenase (gapA) gene, partial cds	IAM 14401 T IAM 14401 is type strain of: Photobacterium phosphoreum	2008/01/01	842
EF415602	Photobacterium phosphoreum strain ATCC 11040 RNA polymerase sigma factor (rpoD) gene, partial cds	ATCC 11040 T ATCC 11040 is type strain of: Photobacterium phosphoreum	2007/08/05	856
EF415585	Photobacterium phosphoreum strain ATCC 11040 DNA-directed RNA polymerase alpha subunit (rpoA) gene, partial cds	ATCC 11040 T ATCC 11040 is type strain of: Photobacterium phosphoreum	2007/08/05	928
EF415550	Photobacterium phosphoreum strain ATCC 11040 recombinase A (recA) gene, partial cds	ATCC 11040 T ATCC 11040 is type strain of: Photobacterium phosphoreum	2007/08/05	834
EF415496	Photobacterium phosphoreum strain ATCC 11040 glyceraldehyde-3-phosphate dehydrogenase (gapA) gene, partial cds	ATCC 11040 T ATCC 11040 is type strain of: Photobacterium phosphoreum	2007/08/05	708
EF380239	Photobacterium phosphoreum strain ATCC 11040 uridylate kinase (pyrH) gene, partial cds	ATCC 11040 T ATCC 11040 is type strain of: Photobacterium phosphoreum	2007/07/26	604
DQ988873	Photobacterium phosphoreum strain ATCC 11040 acyl-CoA reductase (luxC), myristoyl transferase (luxD), alpha subunit luciferase (luxA), beta subunit luciferase (luxB), LuxF (luxF), acyl-protein synthetase (luxE), LuxG (luxG), RibB (ribB), and RibH (ribH) genes, complete cds; and RibA (ribA) gene, partial cds	ATCC 11040 T ATCC 11040 is type strain of: Photobacterium phosphoreum	2007/04/06	10364
AB255705	Photobacterium phosphoreum DNA, 16S-23S rRNA intergenic spacer and 23S rRNA, partial sequence, strain: IAM 14401	IAM 14401 T IAM 14401 is type strain of: Photobacterium phosphoreum	2006/04/18	290
AY779759	Photobacterium phosphoreum strain CIP102511 16S-23S ribosomal RNAintergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence	CIP 102511 T CIP 102511 is type strain of: Photobacterium phosphoreum	2005/11/01	610
AY779758	Photobacterium phosphoreum strain CIP102511 16S-23S ribosomal RNAintergenic spacer, complete sequence	CIP 102511 T CIP 102511 is type strain of: Photobacterium phosphoreum	2005/11/01	391
AY779757	Photobacterium phosphoreum strain CIP102511 16S-23S ribosomal RNAintergenic spacer, complete sequence	CIP 102511 T CIP 102511 is type strain of: Photobacterium phosphoreum	2005/11/01	351
AY779756	Photobacterium phosphoreum strain CIP102511 16S-23S ribosomal RNAintergenic spacer, complete sequence	CIP 102511 T CIP 102511 is type strain of: Photobacterium phosphoreum	2005/11/01	320
AJ842551	Photobacterium phosphoreum partial rpoA gene for RNA polymerase alpha-subunit, strain LMG 4233T	LMG 4233 T LMG 4233 is type strain of: Photobacterium phosphoreum	2005/02/01	928
AJ842365	Photobacterium phosphoreum partial recA gene, strain LMG 4233T	LMG 4233 T LMG 4233 is type strain of: Photobacterium phosphoreum	2005/02/01	768
AY787792	Photobacterium phosphoreum beta-lactamase (ampC) gene, complete cds	ATCC 11040 T ATCC 11040 is type strain of: Photobacterium phosphoreum	2004/12/26	2101
AJ580846	Photobacterium phosphoreum partial mRNA for recombination-repair protein(recA gene), type strain LMG 4233T	LMG 4233 T LMG 4233 is type strain of: Photobacterium phosphoreum	2004/10/28	768
AY455875	Photobacterium phosphoreum strain ATCC 11040 DNA gyrase subunit B (gyrB) gene, partial cds	ATCC 11040 T ATCC 11040 is type strain of: Photobacterium phosphoreum	2004/04/10	1217
AY341437	Photobacterium phosphoreum strain ATCC 11040 16S ribosomal RNA gene,partial sequence	ATCC 11040 T ATCC 11040 is type strain of: Photobacterium phosphoreum	2004/04/10	1467
AF168382	Photobacterium phosphoreum phosphatidylserine synthase (pss) gene, partialcds	ATCC 11040 T ATCC 11040 is type strain of: Photobacterium phosphoreum	2002/12/31	839
AB050789	Photobacterium phosphoreum sodB gene for iron-cofactored superoxidedismutase, partial cds, strain:IAM14401	IAM 14401 T IAM 14401 is type strain of: Photobacterium phosphoreum	2000/11/14	424
AF136386	Photobacterium phosphoreum gyrase B (gyrB) gene, partial cds	ATCC 11040 T ATCC 11040 is type strain of: Photobacterium phosphoreum	1999/05/27	1259

33 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

publications

15 items found, displaying all items.


Urbanczyk H, Ast JC, Higgins MJ, Carson J, Dunlap PV Reclassification of Vibrio fischeri, Vibrio logei, Vibrio salmonicida and Vibrio wodanis as Aliivibrio fischeri gen. nov., comb. nov., Aliivibrio logei comb. nov., Aliivibrio salmonicida comb. nov. and Aliivibrio wodanis comb. nov Int J Syst Evol Microbiol 57(12), 2823-2829, 2007
Kaeding AJ, Ast JC, Pearce MM, Urbanczyk H, Kimura S, Endo H, Nakamura M, Dunlap PV Phylogenetic Diversity and Co-Symbiosis in the Bioluminescent Symbioses of Photobacterium mandapamensis Appl Environ Microbiol 73(10), 3173-3182, 2007
Ast JC, Cleenwerck I, Engelbeen K, Urbanczyk H, Thompson FL, De Vos P, Dunlap PV Photobacterium kishitanii sp. nov., a luminous marine bacterium symbiotic with deep-sea fishes Int J Syst Evol Microbiol 57(9), 2073-2078, 2007
Thompson FL, Gevers D, Thompson CC, Dawyndt P, Naser S, Hoste B, Munn CB, Swings J Phylogeny and molecular identification of vibrios on the basis of multilocus sequence analysis Appl Environ Microbiol 71(9), 5107-5115, 2005
Lin JW, Weng SF, Chao YF, Chung YT Characteristic analysis of the ampC gene encoding beta-lactamase from Photobacterium phosphoreum Biochem Biophys Res Commun 326(3), 539-547, 2005
Thompson CC, Thompson FL, Vandemeulebroecke K, Hoste B, Dawyndt P, Swings J Use of recA as an alternative phylogenetic marker in the family Vibrionaceae Int J Syst Evol Microbiol 54(3), 919-924, 2004
Ast JC, Dunlap PV Phylogenetic analysis of the lux operon distinguishes two evolutionarily distinct clades of Photobacterium leiognathi Arch Microbiol 181(5), 15034641, 2004
Ishimaru, K, Akagawa-Matsushita, M, Muroga, K Vibrio penaeicida sp. nov., a pathogen of Kuruma prawns (Penaeus japonicus) Int J Syst Bacteriol 45, 134-138, 1995
Ruimy R, Breittmayer V, Elbaze P, Lafay B, Boussemart O, Gauthier M, Christen R Phylogenetic analysis and assessment of the genera Vibrio, Photobacterium, Aeromonas, and Plesiomonas deduced from small-subunit rRNA sequences Int J Syst Bacteriol 44(3), 416-426, 1994
Okuzumi M, Hiraishi A, Kobayashi T, Fujii T Photobacterium histaminum sp. nov., a histamine-producing marine bacterium Int J Syst Bacteriol 44, 631-636, 1994
Kita-Tsukamoto K, Oyaizu H, Nanba K, Simidu U Phylogenetic relationships of marine bacteria, mainly members of the family Vibrionaceae, determined on the basis of 16S rRNA sequences Int J Syst Bacteriol 43(1), 8-19, 1993
Giroux S, Cedergren R Evolution of a tRNA operon in gamma purple bacteria J Bacteriol 171(12), 6446-6454, 1989
Approved Lists of Bacterial Names Int J Syst Bacteriol 30, 225-420, 1980
(Unknown) Int J Syst Bacteriol 30, 344, 1980
Hendrie, M S, Hodgkiss, W, Shewan, J M The identifaction, taxonomy and classification of luminous bacteria J Gen Microbiol 64, 151-169, 1970

15 items found, displaying all items.

Strain PassportHAMBI 1726 Photobacterium phosphoreum

Strain Passport
HAMBI 1726 Photobacterium phosphoreum