Strain Passport
LMG 11041 Bifidobacterium bifidum

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accession#	description	strainnumber	date	length
JF332150	Bifidobacterium bifidum nonfunctional galacto-N-biose/lacto-N-biose I-binding protein (gltA) gene, complete cds	JCM 1255 T JCM 1255 is type strain of: Bifidobacterium bifidum	2011/10/10	1381
HM007609	Bifidobacterium bifidum DSM 20456 23S ribosomal RNA gene, partial sequence	DSM 20456 T DSM 20456 is type strain of: Bifidobacterium bifidum	2010/07/04	2558
HM007578	Bifidobacterium bifidum DSM 20456 16S ribosomal RNA gene, partial sequence	DSM 20456 T DSM 20456 is type strain of: Bifidobacterium bifidum	2010/07/04	1344
GU361836	Bifidobacterium bifidum strain KCTC 3202 heat shock protein 60 (hsp60) gene, partial cds	KCTC 3202 T KCTC 3202 is type strain of: Bifidobacterium bifidum	2010/02/05	604
GU361813	Bifidobacterium bifidum strain KCTC 3202 16S ribosomal RNA gene, partial sequence	KCTC 3202 T KCTC 3202 is type strain of: Bifidobacterium bifidum	2010/02/05	1480
GQ340907	Bifidobacterium bifidum DSM 20456 strain ATCC 29521 23S ribosomal RNA gene, partial sequence	ATCC 29521 T ATCC 29521 is type strain of: Bifidobacterium bifidum	2010/01/01	488
AB507078	Bifidobacterium bifidum gene for 16S rRNA, partial sequence, strain: JCM 1255	JCM 1255 T JCM 1255 is type strain of: Bifidobacterium bifidum	2009/06/10	668
EU780710	Bifidobacterium bifidum strain KCTC 3202 RNA polymerase beta subunit (rpoB) gene, partial cds	ATCC 29521 T ATCC 29521 is type strain of: Bifidobacterium bifidum	2009/01/01	315
DQ256093	Bifidobacterium bifidum DnaJ1 (dnaJ1) gene, partial cds	LMG 11041 T LMG 11041 is type strain of: Bifidobacterium bifidum	2006/12/17	386
DQ234402	Bifidobacterium bifidum strain LMG 11041 PurF (purF) gene, partial cds	LMG 11041 T LMG 11041 is type strain of: Bifidobacterium bifidum	2006/12/17	446
DQ234355	Bifidobacterium bifidum strain LMG 11041 DnaG (dnaG) gene, partial cds	LMG 11041 T LMG 11041 is type strain of: Bifidobacterium bifidum	2006/12/17	370
DQ234313	Bifidobacterium bifidum strain LMG 11041 DnaB (dnaB) gene, partial cds	LMG 11041 T LMG 11041 is type strain of: Bifidobacterium bifidum	2006/12/17	207
DQ198389	Bifidobacterium bifidum RpoC (rpoC) gene, partial cds	LMG 11041 T LMG 11041 is type strain of: Bifidobacterium bifidum	2006/12/17	695
EF042118	Bifidobacterium bifidum strain DSMZ 20456 S-ribosylhomocysteinase (luxS) gene, partial cds	DSMZ 20456 T DSMZ 20456 is type strain of: Bifidobacterium bifidum	2006/11/14	305
AB116283	Bifidobacterium bifidum gene for 16S rRNA, partial sequence, strain: JCM 1255	JCM 1255 T JCM 1255 is type strain of: Bifidobacterium bifidum	2005/07/02	477
AB198731	Bifidobacterium bifidum rpoB gene for RNA polymerase beta chain, partial cds, strain: ATCC 29521, rifaximin resistant clone	ATCC 29521 T ATCC 29521 is type strain of: Bifidobacterium bifidum	2005/01/13	129
AB198730	Bifidobacterium bifidum rpoB gene for RNA polymerase beta chain, partial cds, strain: ATCC 29521	ATCC 29521 T ATCC 29521 is type strain of: Bifidobacterium bifidum	2005/01/13	129
AY642888	Bifidobacterium bifidum JCM 1255 GrpE (grpE) gene, partial cds	JCM 1255 T JCM 1255 is type strain of: Bifidobacterium bifidum	2005/01/08	177
AY642868	Bifidobacterium bifidum JCM 1255 DnaK (dnaK) gene, partial cds	JCM 1255 T JCM 1255 is type strain of: Bifidobacterium bifidum	2005/01/08	535
AB179841	Bifidobacterium bifidum mar gene for monomeric aspartate racemase, completecds	NBRC 14252 T NBRC 14252 is type strain of: Bifidobacterium bifidum	2004/12/24	825
AY585252	Bifidobacterium bifidum GroES gene, partial cds	JCM 1255 T JCM 1255 is type strain of: Bifidobacterium bifidum	2004/10/07	196
AY604517	Bifidobacterium bifidum strain ATCC 29521 bile salt hydrolase (bsh) gene,complete cds	ATCC 29521 T ATCC 29521 is type strain of: Bifidobacterium bifidum	2004/05/16	951
AY377398	Bifidobacterium bifidum strain DSM 20456 putative xylulose5-phosphate/fructose 6-phosphate phosphoketolase (xfp) gene, partial cds	DSM 20456 T DSM 20456 is type strain of: Bifidobacterium bifidum	2003/12/30	503
AY487145	Bifidobacterium bifidum strain ATCC 29521 ATP synthase beta chain (atpD)gene, partial cds	ATCC 29521 T ATCC 29521 is type strain of: Bifidobacterium bifidum	2003/12/10	1120
AY372041	Bifidobacterium bifidum strain ATCC 29521 Tuf gene, partial cds	ATCC 29521 T ATCC 29521 is type strain of: Bifidobacterium bifidum	2003/12/04	988

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Gonzalez-Rodriguez I, Sanchez B, Ruiz L, Turroni F, Ventura M, Ruas-Madiedo P, Gueimonde M, Margolles A Role of extracellular transaldolase from Bifidobacterium bifidum in mucin adhesion and aggregation Appl Environ Microbiol , 2012
Asakuma S, Hatakeyama E, Urashima T, Yoshida E, Katayama T, Yamamoto K, Kumagai H, Ashida H, Hirose J, Kitaoka M Physiology of Consumption of Human Milk Oligosaccharides by Infant Gut-associated Bifidobacteria J Biol Chem 286(40), 34583-34592, 2011
Kim BJ, Kim HY, Yun YJ, Kim BJ, Kook YH Differentiation of Bifidobacterium species using partial RNA polymerase {beta}-subunit (rpoB) gene sequences Int J Syst Evol Microbiol , 2010
Sakata S, Ryu CS, Kitahara M, Sakamoto M, Hayashi H, Fukuyama M, Benno Y Characterization of the genus Bifidobacterium by automated ribotyping and 16S rRNA gene sequences Microbiol Immunol 50(1), 1-10, 2006
Ventura M, Canchaya C, Del Casale A, Dellaglio F, Neviani E, Fitzgerald GF, van Sinderen D Analysis of bifidobacterial evolution using a multilocus approach Int J Syst Evol Microbiol 56(Pt 12), 2783-2792, 2006
Berthoud H, Chavagnat F, Haueter M, Casey MG Comparison of partial gene sequences encoding a phosphoketolase for the identification of bifidobacteria Lebensm Wiss Technol 38(1), 101-105, 2005
Ventura M, Zink R, Fitzgerald GF, van Sinderen D Gene structure and transcriptional organization of the dnaK operon of Bifidobacterium breve UCC 2003 and application of the operon in bifidobacterial tracing Appl Environ Microbiol 71(1), 487-500, 2005
Yamashita T, Ashiuchi M, Ohnishi K, Kato S, Nagata S, Misono H Molecular identification of monomeric aspartate racemase from Bifidobacterium bifidum Eur J Biochem 271(23-24), 4798-4803, 2004
Kim GB, Miyamoto CM, Meighen EA, Lee BH Cloning and characterization of the bile salt hydrolase genes (bsh) from Bifidobacterium bifidum strains Appl Environ Microbiol 70(9), 5603-5612, 2004
Ventura M, Canchaya C, van Sinderen D, Fitzgerald GF, Zink R Bifidobacterium lactis DSM 10140: identification of the atp (atpBEFHAGDC) operon and analysis of its genetic structure, characteristics, and phylogeny Appl Environ Microbiol 70(5), 3110-3121, 2004
Ventura M, Canchaya C, Zink R, Fitzgerald GF, van Sinderen D Characterization of the groEL and groES loci in Bifidobacterium breve UCC 2003: genetic, transcriptional, and phylogenetic analyses Appl Environ Microbiol 70(10), 6197-6209, 2004
Ventura M, Canchaya C, Meylan V, Klaenhammer TR, Zink R Analysis, characterization, and loci of the tuf genes in lactobacillus and bifidobacterium species and their direct application for species identification Appl Environ Microbiol 69(11), 6908-6922, 2003
Requena T, Burton J, Matsuki T, Munro K, Simon MA, Tanaka R, Watanabe K, Tannock GW Identification, detection, and enumeration of human bifidobacterium species by PCR targeting the transaldolase gene Appl Environ Microbiol 68(5), 2420-2427, 2002
Jian W, Zhu L, Dong X New approach to phylogenetic analysis of the genus Bifidobacterium based on partial HSP60 gene sequences Int J Syst Evol Microbiol 51(5), 1633-1638, 2001
Mangin I, Bouhnik Y, Bisetti N, Decaris B Molecular monitoring of human intestinal Bifidobacterium strain diversity Res Microbiol 150(5), 343-350, 1999
Matsuki T, Watanabe K, Tanaka R, Oyaizu H Rapid identification of human intestinal bifidobacteria by 16S rRNA-targeted species- and group-specific primers FEMS Microbiol Lett 167(2), 113-121, 1998
Mangin I, Bourget N, Decaris B Ribosomal DNA polymorphism in the genus Bifidobacterium Res Microbiol 147(3), 183-192, 1996
Frothingham R, Duncan AJ, Wilson KH Ribosomal DNA sequence of bifidobacteria: implications for sequence-based identification of the human colonic flora Microb Ecol Health Dis 6, 23-27, 1993
Ludwig W, Kirchhof G, Weizenegger M, Weiss N Phylogenetic evidence for the transfer of Eubacterium suis to the genus Actinomyces as Actinomyces suis comb. nov Int J Syst Bacteriol 42(1), 161-165, 1992
Roller C, Ludwig W, Schleifer KH Gram-positive bacteria with a high DNA G+C content are characterized by a common insertion within their 23S rRNA genes J Gen Microbiol 138(6), 1167-1175, 1992
Chevalier P, Roy D, Ward P Detection of Bifidobacterium species by enzymatic methods J Appl Bacteriol 68(6), 619-624, 1990
Roy, D, Ward, P Evaluation of rapid methods for differentiation of Bifidobacterium species J Appl Bacteriol 69, 739-749, 1990
Lauer E Bifidobacterium gallicum sp. nov. isolated from human feces Int J Syst Bacteriol 40(1), 100-102, 1990
Lauer, E, Kandler, O DNA-DNA homology, murein types and enzyme patterns in the type strains of the genus Bifidobacterium Syst Appl Microbiol 4, 42-64, 1983
(Unknown) Int J Syst Bacteriol 30, 264, 1980

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