Strain Passport
FIRDI 931 Vibrio fischeri

accession#	description	strainnumber	date	length
JF893445	Aliivibrio fischeri strain DSM 507 cell division protein FtsA (ftsA) gene, partial cds	DSM 507 T DSM 507 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2011/10/05	462
JF815027	Aliivibrio fischeri strain DSM 507 rod shape-determining protein MreB (mreB) gene, partial cds	DSM 507 T DSM 507 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2011/10/03	1041
JF509899	Aliivibrio fischeri strain ATCC 7744 luciferase alpha chain (luxA) gene, partial cds	ATCC 7744 T ATCC 7744 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2011/09/06	870
JF509855	Aliivibrio fischeri strain ATCC 7744 dihydroorotase (pyrC) gene, partial cds	ATCC 7744 T ATCC 7744 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2011/09/06	882
JF509797	Aliivibrio fischeri strain ATCC 7744 C8 HSL autoinducer synthase (ainS) gene, partial cds	ATCC 7744 T ATCC 7744 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2011/09/06	780
JF509753	Aliivibrio fischeri strain ATCC 7744 recombinase A (recA) gene, partial cds	ATCC 7744 T ATCC 7744 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2011/09/06	690
FN423813	Vibrio fischeri partial rpoB gene for RNA polymerase beta subunit, strain DSM 507	DSM 507 T DSM 507 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2010/06/21	871
EU907989	Vibrio fischeri strain ATCC 7744 catalase (katA) gene, partial cds	ATCC 7744 T ATCC 7744 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2009/02/03	789
EU907965	Vibrio fischeri strain ATCC 7744 malate dehydrogenase (mdh) gene, partial cds	ATCC 7744 T ATCC 7744 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2009/02/03	783
EU907941	Vibrio fischeri strain ATCC 7744 RecA (recA) gene, partial cds	ATCC 7744 T ATCC 7744 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2009/02/03	531
EF601271	Vibrio fischeri strain LMG 4414 ATPase (atpA) gene, partial cds	LMG 4414 T LMG 4414 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2007/11/09	1209
EF415594	Vibrio fischeri strain ATCC 7744 RNA polymerase sigma factor (rpoD) gene, partial cds	ATCC 7744 T ATCC 7744 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2007/08/05	838
EF415578	Vibrio fischeri strain ATCC 7744 DNA-directed RNA polymerase alpha subunit (rpoA) gene, partial cds	ATCC 7744 T ATCC 7744 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2007/08/05	928
EF415542	Vibrio fischeri strain ATCC 7744 recombinase A (recA) gene, partial cds	ATCC 7744 T ATCC 7744 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2007/08/05	797
EF415528	Vibrio fischeri strain ATCC 7744 uridylate kinase (pyrH) gene, partial cds	ATCC 7744 T ATCC 7744 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2007/08/05	604
EF415488	Vibrio fischeri strain ATCC 7744 glyceraldehyde-3-phosphate dehydrogenase (gapA) gene, partial cds	ATCC 7744 T ATCC 7744 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2007/08/05	774
AB103539	Vibrio fischeri genes for excision nuclease subunit B, LuxO, LuxU, hypothetical protein, complete cds	ATCC 7744 T ATCC 7744 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2007/01/06	5262
AB090807	Aliivibrio fischeri luxMUp2, luxMUp1, luxM, luxN, luxNDn1, luxNDn2 genes, partial and complete cds	ATCC 7744 T ATCC 7744 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2007/01/06	6583
AB087500	Vibrio fischeri pfs, cbiB genes for MTA/SAH nucleosidase, cobalamin biosynthesis protein CbiB, complete and partial cds	ATCC 7744 T ATCC 7744 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2007/01/06	1496
AB086408	Vibrio fischeri thiL, pgpA, luxP, luxQ, dxs, ispA genes for thiamine monophosphate kinase, phosphatidylglycerophosphatase A, bioluminescence regulatory protein, bioluminescence regulatory protein, 1-deoxyxylulose-5-phosphate synthase, geranyltranstransferase, complete and partial CDS	ATCC 7744 T ATCC 7744 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2007/01/06	7866
AB086190	Vibrio fischeri hpt, luxR2, tnpB genes for hypoxanthine ribosyl transferase, transcriptional regulator, transposase, complete cds	ATCC 7744 T ATCC 7744 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2007/01/06	2694
AB083335	Vibrio fischeri genes for LuxS and others, partial and complete cds	ATCC 7744 T ATCC 7744 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2007/01/06	3497
DQ207634	Vibrio fischeri strain ATCC 7744 pilD gene, complete sequence	ATCC 7744 T ATCC 7744 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2006/12/30	871
AB107370	Vibrio fischeri genes for LuxR protein, hypothetical proteins, putative carboxypeptidase G2, partial and complete cds	ATCC 7744 T ATCC 7744 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2006/12/08	7898
AB105805	Vibrio fischeri gene, lux operon downstream region, partial and complete cds	ATCC 7744 T ATCC 7744 is type strain of: Aliivibrio fischeri Photobacterium fischeri Vibrio fischeri	2006/12/08	5884

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publications

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Wollenberg MS, Ruby EG Phylogeny and fitness of Vibrio fischeri from the light organs of Euprymna scolopes in two Oahu, Hawaii populations ISME J , 2011
Dieckmann R, Strauch E, Alter T Rapid identification and characterization of Vibrio species using whole-cell MALDI-TOF mass spectrometry J Appl Microbiol 109(1), 199-211, 2010
Mandel MJ, Wollenberg MS, Stabb EV, Visick KL, Ruby EG A single regulatory gene is sufficient to alter bacterial host range Nature 458(7235), 215-218, 2009
Browne-Silva J, Nishiguchi MK Gene sequences of the pil operon reveal relationships between symbiotic strains of Vibrio fischeri Int J Syst Evol Microbiol 58(6), 1292-1299, 2008
Thompson CC, Thompson FL, Vicente AC, Swings J Phylogenetic analysis of vibrios and related species by means of atpA gene sequences Int J Syst Evol Microbiol 57(11), 2480-2484, 2007
Ast JC, Cleenwerck I, Engelbeen K, Urbanczyk H, Thompson FL, De Vos P, Dunlap PV Photobacterium kishitanii sp. nov., a luminous marine bacterium symbiotic with deep-sea fishes Int J Syst Evol Microbiol 57(9), 2073-2078, 2007
Kasai S, Okada K, Hoshino A, Iida T, Honda T Lateral transfer of the lux gene cluster J Biochem 141(2), 231-237, 2007
Brown DW, Cheung F, Proctor RH, Butchko RA, Zheng L, Lee Y, Utterback T, Smith S, Feldblyum T, Glenn AE, Plattner RD, Kendra DF, Town CD, Whitelaw CA Comparative analysis of 87,000 expressed sequence tags from the fumonisin-producing fungus Fusarium verticillioides Fungal Genet Biol 42(10), 848-861, 2005
Thompson FL, Gevers D, Thompson CC, Dawyndt P, Naser S, Hoste B, Munn CB, Swings J Phylogeny and molecular identification of vibrios on the basis of multilocus sequence analysis Appl Environ Microbiol 71(9), 5107-5115, 2005
Ast JC, Dunlap PV Phylogenetic analysis of the lux operon distinguishes two evolutionarily distinct clades of Photobacterium leiognathi Arch Microbiol 181(5), 15034641, 2004
Thompson CC, Thompson FL, Vandemeulebroecke K, Hoste B, Dawyndt P, Swings J Use of recA as an alternative phylogenetic marker in the family Vibrionaceae Int J Syst Evol Microbiol 54(3), 919-924, 2004
Rowe-Magnus DA, Guerout AM, Biskri L, Bouige P, Mazel D Comparative analysis of superintegrons: engineering extensive genetic diversity in the Vibrionaceae Genome Res 13(3), 428-442, 2003
Nishiguchi MK, Nair VS Evolution of symbiosis in the Vibrionaceae: a combined approach using molecules and physiology Int J Syst Evol Microbiol 53(6), 2019-2026, 2003
Gyllenberg M, Koski T, Dawyndt P, Lund T, Thompson F, Austin B, Swings J New methods for the analysis of binarized BIOLOG GN data of Vibrio species: minimization of stochastic complexity and cumulative classification Syst Appl Microbiol 25(3), 403-415, 2002
Kasai S, Sumimoto T Stimulated biosynthesis of flavins in Photobacterium phosphoreum IFO 13896 and the presence of complete rib operons in two species of luminous bacteria Eur J Biochem 269(23), 5851-5860, 2002
Kasai S, Yamazaki T Identification of the cobalamin-dependent methionine synthase gene, metH, in Vibrio fischeri ATCC 7744 by sequencing using genomic DNA as a template Gene 264(2), 281-288, 2001
Rowe-Magnus DA, Guerout AM, Ploncard P, Dychinco B, Davies J, Mazel D The evolutionary history of chromosomal super-integrons provides an ancestry for multiresistant integrons Proc Natl Acad Sci U S A 98(2), 652-657, 2001
Chen HY, Weng SF, Lin JW Identification and analysis of the sap genes from Vibrio fischeri belonging to the ATP-binding cassette gene family required for peptide transport and resistance to antimicrobial peptides Biochem Biophys Res Commun 269(3), 743-748, 2000
Ramaiah N, Hill RT, Chun J, Ravel J, Matte MH, Straube WL, Colwell RR Use of a chiA probe for detection of chitinase genes in bacteria from the Chesapeake Bay(1) FEMS Microbiol Ecol 34(1), 63-71, 2000
Lin JW, Chen LM, Chen HY, Weng SF Identification and analysis of the regulatory region R&R* with the cnf1 gene encoding the cytotoxic necrotizing factor type 1 that closely links to the lux regulon of Vibrio fischeri Biochem Biophys Res Commun 250(2), 462-465, 1998
Sitnikov DM, Schineller JB, Baldwin TO Control of cell division in Escherichia coli: regulation of transcription of ftsQA involves both rpoS and SdiA-mediated autoinduction Proc Natl Acad Sci U S A 93(1), 336-341, 1996
Ishimaru, K, Akagawa-Matsushita, M, Muroga, K Vibrio penaeicida sp. nov., a pathogen of Kuruma prawns (Penaeus japonicus) Int J Syst Bacteriol 45, 134-138, 1995
(Unknown) Int J Syst Bacteriol 45, 423, 1995
Wiik R, Stackebrandt E, Valle O, Daae FL, Rodseth OM, Andersen K Classification of fish-pathogenic vibrios based on comparative 16S rRNA analysis Int J Syst Bacteriol 45(3), 421-428, 1995
Zenno S, Saigo K Identification of the genes encoding NAD(P)H-flavin oxidoreductases that are similar in sequence to Escherichia coli Fre in four species of luminous bacteria: Photorhabdus luminescens, Vibrio fischeri, Vibrio harveyi, and Vibrio orientalis J Bacteriol 176(12), 3544-3551, 1994

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Strain PassportFIRDI 931 Vibrio fischeri

Strain Passport
FIRDI 931 Vibrio fischeri