Strain Passport
DSM 20088 Bifidobacterium longum

overview

species name

Bifidobacterium dentium

all known species names for this strain
*Bifidobacterium dentium*
Bifidobacterium longum
Bifidobacterium infantis
Bifidobacterium longum subsp. infantis

type strain of

Bifidobacterium infantis, Bifidobacterium longum subsp. infantis

strain numbers

AS 1.1853 ^{T

AS 1.1853 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , AS 1.1853/1.2202^T , AS 1.2202 ^{T

AS 1.2202 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , ATCC 15697 ^{T

ATCC 15697 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , BCRC 14602 ^{T

BCRC 14602 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , BCRC 15416 ^{T

BCRC 15416 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , BF 38 ^{T

BF 38 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , BF38,^T , CCM 4990 ^{T

CCM 4990 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , CCRC 14602 ^{T

CCRC 14602 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , CCRC 15416 ^{T

CCRC 15416 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , CCTM 3067 ^{T

CCTM 3067 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , CCTM La 3067 ^{T

CCTM La 3067 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , CCUG 18368 ^{T

CCUG 18368 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , CCUG 30512 ^{T

CCUG 30512 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , CCUG 30512 B ^{T

CCUG 30512 B is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , CECT 4551 ^{T

CECT 4551 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , CGMCC 1.1853 ^{T

CGMCC 1.1853 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , CGMCC 1.2202 ^{T

CGMCC 1.2202 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , CIP 64.67 ^{T

CIP 64.67 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , CIP 64.67T^T , CUETM 89-19 ^{T

CUETM 89-19 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , DSM 20088 ^{T

DSM 20088 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , DSMZ 20088^T , E-97796 ^{T

E-97796 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , G. Reuter S12 ^{T

G. Reuter S12 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , HAMBI 1374 ^{T

HAMBI 1374 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , HAMBI 555 ^{T

HAMBI 555 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , HAMBI 574 ^{T

HAMBI 574 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , JCM 1222 ^{T

JCM 1222 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , KCTC 3249 ^{T

KCTC 3249 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , KCTC 3270 ^{T

KCTC 3270 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , LMG 10499 ^{T

LMG 10499 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , LMG 11046 ^{T

LMG 11046 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , LMG 13203 ^{T

LMG 13203 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , LMG 8811 ^{T

LMG 8811 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , NCAIM B.01821 ^{T

NCAIM B.01821 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , NCDO 2205 ^{T

NCDO 2205 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , NCFB 2205 ^{T

NCFB 2205 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , NCIMB 702205 ^{T

NCIMB 702205 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , NCTC 11817 ^{T

NCTC 11817 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , NRRL B-41661 ^{T

NRRL B-41661 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , PRSF-B 069 ^{T

PRSF-B 069 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , PRSF-B 072 ^{T

PRSF-B 072 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , Quest Q90435 ^{T

Quest Q90435 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , Reuter S12 ^{T

Reuter S12 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , S12 ^{T

S12 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , VTT E-021916 ^{T

VTT E-021916 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis} , VTT E-97796 ^{T

VTT E-97796 is type strain of:

Bifidobacterium infantis

Bifidobacterium longum subsp. infantis}

availability map

BRC strain browser

history

This Histri was manually curated (last saved on 2008-08-21).

Histri

sequences

33 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

accession#	description	strainnumber	date	length
GQ340901	Bifidobacterium longum subsp. infantis strain ATCC 15697 23S ribosomal RNAgene, partial sequence	ATCC 15697 ^{T ATCC 15697 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2010/01/01	895
AB507102	Bifidobacterium longum gene for 16S rRNA, partial sequence, strain: JCM1222	JCM 1222 ^{T JCM 1222 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2009/06/10	658
FJ549355	Bifidobacterium longum subsp. infantis strain BCRC14602 Tuf (tuf) gene,partial cds	BCRC 14602 ^{T BCRC 14602 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2009/01/27	771
CP001095	Bifidobacterium longum subsp. infantis ATCC 15697, complete genome	ATCC 15697 ^{T ATCC 15697 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2008/12/24	2832748
AY722381	Bifidobacterium longum bv. Infantis strain JCM 1222 ClpC (clpC) gene,partial cds	JCM 1222 ^{T JCM 1222 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2007/09/10	617
DQ256107	Bifidobacterium longum bv. Infantis DnaJ1 (dnaJ1) gene, partial cds	LMG 8811 ^{T LMG 8811 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2006/12/17	401
DQ234329	Bifidobacterium longum bv. Infantis strain LMG 8811 DnaB (dnaB) gene,partial cds	LMG 8811 ^{T LMG 8811 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2006/12/17	207
DQ234370	Bifidobacterium longum bv. Infantis strain LMG 8811 DnaG (dnaG) gene,partial cds	LMG 8811 ^{T LMG 8811 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2006/12/17	370
DQ198405	Bifidobacterium longum bv. Infantis RpoC (rpoC) gene, partial cds	LMG 8811 ^{T LMG 8811 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2006/12/17	695
DQ234418	Bifidobacterium longum bv. Infantis strain LMG 8811 PurF (purF) gene,partial cds	LMG 8811 ^{T LMG 8811 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2006/12/17	446
AY955238	Bifidobacterium longum bv. Infantis strain JCM 1222 predicted ATP-dependentClp protease proteolytic subunit 2 (clpP2) gene, partial cds	JCM 1222 ^{T JCM 1222 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2005/12/05	482
AY955248	Bifidobacterium longum bv. Infantis strain JCM 1222 predicted ATP-dependentClp protease proteolytic subunit 1 (clpP1) gene, partial cds	JCM 1222 ^{T JCM 1222 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2005/12/05	423
AB116305	Bifidobacterium longum bv. Infantis gene for 16S ribosomal RNA, partialsequence, strain: JCM 1222T	JCM 1222 ^{T JCM 1222 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2005/07/02	472
AB198724	Bifidobacterium longum subsp. infantis rpoB gene for RNA polymerase betachain, partial cds, strain: ATCC 15697	ATCC 15697 ^{T ATCC 15697 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2005/01/13	129
AB198725	Bifidobacterium longum subsp. infantis rpoB gene for RNA polymerase betachain, partial cds, strain: ATCC 15697, rifaximin resistant clone	ATCC 15697 ^{T ATCC 15697 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2005/01/13	129
AY642882	Bifidobacterium longum bv. Infantis JCM 1222 GrpE (grpE) gene, partial cds	JCM 1222 ^{T JCM 1222 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2005/01/08	177
AY642867	Bifidobacterium longum bv. Infantis JCM 1222 DnaK (dnaK) gene, partial cds	JCM 1222 ^{T JCM 1222 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2005/01/08	535
AY585254	Bifidobacterium longum bv. Infantis GroES gene, partial cds	JCM 1222 ^{T JCM 1222 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2004/10/07	196
AY377410	Bifidobacterium longum strain DSM 20088 putative xylulose5-phosphate/fructose 6-phosphate phosphoketolase (xfp) gene, partial cds	DSM 20088 ^{T DSM 20088 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2003/12/30	503
AY487150	Bifidobacterium longum bv. Infantis strain ATCC 15697 ATP synthase betachain (atpD) gene, partial cds	ATCC 15697 ^{T ATCC 15697 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2003/12/10	1121
AY372043	Bifidobacterium longum bv. Infantis strain ATCC 15697 Tuf gene, partialcds	ATCC 15697 ^{T ATCC 15697 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2003/12/04	990
AF384976	Bifidobacterium infantis pyruvate kinase gene, partial cds	CIP 64.67 ^{T CIP 64.67 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2002/06/03	331
AF417529	Bifidobacterium infantis strain ATCC 15697 transaldolase gene, partial cds	ATCC 15697 ^{T ATCC 15697 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2001/10/23	301
AJ224436	Bifidobacterium infantis gene for beta-galactosidase	DSM 20088 ^{T DSM 20088 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2000/10/27	4328
AF261679	Bifidobacterium infantis strain ATCC 15697 L-lactate dehydrogenase gene,partial cds	ATCC 15697 ^{T ATCC 15697 is type strain of: Bifidobacterium infantis Bifidobacterium longum subsp. infantis}	2000/05/19	309

33 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

publications

34 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]


Vitali B, Turroni S, Serina S, Sosio M, Vannini L, Candela M, Guerzoni ME, Brigidi P Molecular and phenotypic traits of in-vitro-selected mutants of Bifidobacterium resistant to rifaximin Int J Antimicrob Agents 31(6), 555-560, 2008
Sela DA, Chapman J, Adeuya A, Kim JH, Chen F, Whitehead TR, Lapidus A, Rokhsar DS, Lebrilla CB, German JB, Price NP, Richardson PM, Mills DA The genome sequence of Bifidobacterium longum subsp. infantis reveals adaptations for milk utilization within the infant microbiome Proc Natl Acad Sci U S A 105(48), 18964-18969, 2008
Sakata S, Ryu CS, Kitahara M, Sakamoto M, Hayashi H, Fukuyama M, Benno Y Characterization of the genus Bifidobacterium by automated ribotyping and 16S rRNA gene sequences Microbiol Immunol 50(1), 1-10, 2006
Ventura M, Canchaya C, Del Casale A, Dellaglio F, Neviani E, Fitzgerald GF, van Sinderen D Analysis of bifidobacterial evolution using a multilocus approach Int J Syst Evol Microbiol 56(Pt 12), 2783-2792, 2006
Berthoud H, Chavagnat F, Haueter M, Casey MG Comparison of partial gene sequences encoding a phosphoketolase for the identification of bifidobacteria Lebensm Wiss Technol 38(1), 101-105, 2005
Ventura M, Zhang Z, Cronin M, Canchaya C, Kenny JG, Fitzgerald GF, van Sinderen D The ClgR protein regulates transcription of the clpP operon in Bifidobacterium breve UCC 2003. J Bacteriol 187(24), 8411-8426, 2005
Ventura M, Zink R, Fitzgerald GF, van Sinderen D Gene structure and transcriptional organization of the dnaK operon of Bifidobacterium breve UCC 2003 and application of the operon in bifidobacterial tracing Appl Environ Microbiol 71(1), 487-500, 2005
Ventura M, Canchaya C, van Sinderen D, Fitzgerald GF, Zink R Bifidobacterium lactis DSM 10140: identification of the atp (atpBEFHAGDC) operon and analysis of its genetic structure, characteristics, and phylogeny Appl Environ Microbiol 70(5), 3110-3121, 2004
Ventura M, Canchaya C, Zink R, Fitzgerald GF, van Sinderen D Characterization of the groEL and groES loci in Bifidobacterium breve UCC 2003: genetic, transcriptional, and phylogenetic analyses Appl Environ Microbiol 70(10), 6197-6209, 2004
Ventura M, Canchaya C, Meylan V, Klaenhammer TR, Zink R Analysis, characterization, and loci of the tuf genes in lactobacillus and bifidobacterium species and their direct application for species identification Appl Environ Microbiol 69(11), 6908-6922, 2003
Sakata S, Kitahara M, Sakamoto M, Hayashi H, Fukuyama M, Benno Y Unification of Bifidobacterium infantis and Bifidobacterium suis as Bifidobacterium longum Int J Syst Evol Microbiol 52(6), 1945-1951, 2002
Requena T, Burton J, Matsuki T, Munro K, Simon MA, Tanaka R, Watanabe K, Tannock GW Identification, detection, and enumeration of human bifidobacterium species by PCR targeting the transaldolase gene Appl Environ Microbiol 68(5), 2420-2427, 2002
Jian W, Zhu L, Dong X New approach to phylogenetic analysis of the genus Bifidobacterium based on partial HSP60 gene sequences Int J Syst Evol Microbiol 51(5), 1633-1638, 2001
Mangin I, Bouhnik Y, Bisetti N, Decaris B Molecular monitoring of human intestinal Bifidobacterium strain diversity Res Microbiol 150(5), 343-350, 1999
Miyake T, Watanabe K, Watanabe T, Oyaizu H Phylogenetic analysis of the genus Bifidobacterium and related genera based on 16S rDNA sequences Microbiol Immunol 42(10), 661-667, 1998
Kullen MJ, Brady LJ, O'Sullivan DJ Evaluation of using a short region of the recA gene for rapid and sensitive speciation of dominant bifidobacteria in the human large intestine FEMS Microbiol Lett 154(2), 377-383, 1997
Mangin I, Bourget N, Decaris B Ribosomal DNA polymorphism in the genus Bifidobacterium Res Microbiol 147(3), 183-192, 1996
Wang RF, Cao WW, Cerniglia CE PCR detection and quantitation of predominant anaerobic bacteria in human and animal fecal samples Appl Environ Microbiol 62(4), 1242-1247, 1996
Leblond-Bourget N, Philippe H, Mangin I, Decaris B 16S rRNA and 16S to 23S internal transcribed spacer sequence analyses reveal inter- and intraspecific Bifidobacterium phylogeny Int J Syst Bacteriol 46(1), 102-111, 1996
Kok RG, de Waal A, Schut F, Welling GW, Weenk G, Hellingwerf KJ Specific detection and analysis of a probiotic Bifidobacterium strain in infant feces Appl Environ Microbiol 62(10), 3668-3672, 1996
Frothingham R, Duncan AJ, Wilson KH Ribosomal DNA sequence of bifidobacteria: implications for sequence-based identification of the human colonic flora Microb Ecol Health Dis 6, 23-27, 1993
Roller C, Ludwig W, Schleifer KH Gram-positive bacteria with a high DNA G+C content are characterized by a common insertion within their 23S rRNA genes J Gen Microbiol 138(6), 1167-1175, 1992
Roy, D, Ward, P Evaluation of rapid methods for differentiation of Bifidobacterium species J Appl Bacteriol 69, 739-749, 1990
Lauer E Bifidobacterium gallicum sp. nov. isolated from human feces Int J Syst Bacteriol 40(1), 100-102, 1990
Lauer, E, Kandler, O DNA-DNA homology, murein types and enzyme patterns in the type strains of the genus Bifidobacterium Syst Appl Microbiol 4, 42-64, 1983

34 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

Strain PassportDSM 20088 Bifidobacterium longum

Strain Passport
DSM 20088 Bifidobacterium longum