Erdman 3I1b123 Strain Passport

overview

species name

all known species names for this strain
*Bradyrhizobium japonicum*
Rhizobium sp.

strain numbers

ACCC 15036

,

BCRC 13529

,

CCRC 13529

,

Erdman 3I1b123

,

ICMP 12778

,

JCM 10834

,

LMG 6136

,

NIFTAL 376

,

NZP 5533

,

USDA 123

availability map

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history

This Histri was manually curated (last saved on 2009-01-08).

Histri

sequences

16 items found, displaying all items.

accession#	description	strainnumber	date	length
JN686035	Bradyrhizobium japonicum USDA 123 phosphoribosylaminoimidazole-succinocarboxamide synthase (purC) gene, partial cds	USDA 123	2011/11/24	394
JN685983	Bradyrhizobium japonicum USDA 123 malate dehydrogenase (mdh) gene, partial cds	USDA 123	2011/11/24	451
JN685936	Bradyrhizobium japonicum USDA 123 acetolactate synthase (ilvI) gene, partial cds	USDA 123	2011/11/24	375
JN685895	Bradyrhizobium japonicum USDA 123 glyceraldehyde-3-phosphate dehydrogenase (gap) gene, partial cds	USDA 123	2011/11/24	446
JN685826	Bradyrhizobium japonicum USDA 123 aspartate semialdehyde dehydrogenase (asd) gene, partial cds	USDA 123	2011/11/24	434
JN685779	Bradyrhizobium japonicum USDA 123 GTP-binding membrane protein (lepA) gene, partial cds	USDA 123	2011/11/24	434
JN685729	Bradyrhizobium japonicum USDA 123 DNA topoisomerase IV subunit B (gyrB) gene, partial cds	USDA 123	2011/11/24	438
HQ143392	Bradyrhizobium japonicum strain USDA123 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	USDA 123	2011/10/04	910
AB100752	Bradyrhizobium japonicum DNA, 16S-23S ITS1 region, tRNA-Ile, tRNA-Ala, strain: USDA 123	USDA 123	2003/01/25	783
AJ534589	Bradyrhizobium japonicum ITS1, strain LMG 6136	LMG 6136	2003/01/06	808
AF484258	Bradyrhizobium japonicum strain USDA 123 dinitrogenase alpha subunit (nifD)gene, partial cds	USDA 123	2002/03/20	806
AF271639	Bradyrhizobium japonicum strain USDA 123 16S-23S intergenic spacer, partialsequence	USDA 123	2001/08/06	809
AF363151	Bradyrhizobium japonicum strain USDA 123 16S ribosomal RNA gene, partialsequence	USDA 123	2001/05/08	1345
AF338866	Bradyrhizobium japonicum strain USDA 123 tRNA-Ile and tRNA-Ala genes,complete sequence; and 23S ribosomal RNA gene, partial sequence	USDA 123	2001/03/29	856
AF208504	Bradyrhizobium japonicum strain USDA 123 16S ribosomal RNA gene, partialsequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomalRNA gene, partial sequence	USDA 123	2000/12/03	2684
AF236088	Bradyrhizobium japonicum strain USDA 123 16S ribosomal RNA gene, partialsequence	USDA 123	2000/03/28	501

16 items found, displaying all items.

publications

6 items found, displaying all items.


van Berkum PB, Elia P, Song Q, Eardly BD Development and application of a multilocus sequence analysis method for the identification of genotypes within the genus Bradyrhizobium and for establishing nodule occupancy of soybean (Glycine max L. Merr) Mol Plant Microbe Interact , 2011
Saeki Y, Aimi N, Hashimoto M, Tsukamoto S, Kaneko A, Yoshida N, Nagatomo Y, Akao S Grouping of Bradyrhizobium USDA strains by Sequence Analysis of 16S rDNA and 16S-23S rDNA Internal Transcribed Spacer Region Soil Sci Plant Nutr 50, 517-525, 2004
Willems A, Munive A, de Lajudie P, Gillis M In most bradyrhizobium groups sequence comparison of 16S-23S rDNA internal transcribed spacer regions corroborates DNA-DNA hybridizations Syst Appl Microbiol 26(2), 203-210, 2003
Parker MA, Lafay B, Burdon JJ, van Berkum P Conflicting phylogeographic patterns in rRNA and nifD indicate regionally restricted gene transfer in Bradyrhizobium Microbiology 148(8), 2557-2565, 2002
Tan Z, Hurek T, Vinuesa P, Muller P, Ladha JK, Reinhold-Hurek B Specific detection of Bradyrhizobium and Rhizobium strains colonizing rice (Oryza sativa) roots by 16S-23S ribosomal DNA intergenic spacer-targeted PCR Appl Environ Microbiol 67(8), 3655-3664, 2001
van Berkum P, Fuhrmann JJ Evolutionary relationships among the soybean bradyrhizobia reconstructed from 16S rRNA gene and internally transcribed spacer region sequence divergence Int J Syst Evol Microbiol 50 Pt 6, 2165-2172, 2000

6 items found, displaying all items.

Strain PassportErdman 3I1b123 Bradyrhizobium japonicum

Strain Passport
Erdman 3I1b123 Bradyrhizobium japonicum