Strain Passport
Moran DSS-3 Ruegeria pomeroyi

overview
species name
all known species names for this strain
Ruegeria pomeroyi
Silicibacter pomeroyi
type strain of Ruegeria pomeroyi, Silicibacter pomeroyi
16S Sequence AF098491
strain numbers
ATCC 700808
T
,
CECT 7647
T
,
DSM 15171
T
,
DSS-3
T
,
LMG 23168
T
,
Moran DSS-3
T
,
strain DSS-3
T
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help on Histri history
This Histri was built automatically but not manually verified. As a consequence, the Histri can be incomplete or can contain errors.
sequences
15 items found, displaying all items.
accession# description strainnumber date length
HG323163 TPA: Ruegeria pomeroyi DSS-3 SRP RNA for signal recognition particle RNA
DSS-3
T
2013/07/04 100
FR852583 Ruegeria pomeroyi DSS-3 SPO1905 gene for fumarate hydratase, strain DSM 15171
DSM 15171
T
2011/05/16 400
FR852582 Ruegeria pomeroyi DSS-3 partial SPO_PG039 gene for stress protein, strain DSM 15171
DSM 15171
T
2011/05/16 165
FR852581 Ruegeria pomeroyi DSS-3 partial SPO_PG038 gene for aminotransferase, strain DSM 15171
DSM 15171
T
2011/05/16 732
FR852580 Ruegeria pomeroyi DSS-3 SPO_PG037 gene for heat shock protein, strain DSM 15171
DSM 15171
T
2011/05/16 749
FR852579 Ruegeria pomeroyi DSS-3 SPO_PG036 gene for ABC transporter, strain DSM 15171
DSM 15171
T
2011/05/16 424
DQ915707 Silicibacter pomeroyi strain DSM15171 RNA polymerase subunit B (rpoB) gene, partial cds
DSM 15171
T
2008/08/31 489
DQ915669 Silicibacter pomeroyi strain DSM15171 DNA gyrase subunit b (gyrB) gene, partial cds
DSM 15171
T
2008/08/31 1071
DQ915631 Silicibacter pomeroyi strain DSM15171 16S ribosomal RNA gene, partial sequence
DSM 15171
T
2008/08/31 1306
EF010917 Silicibacter pomeroyi strain DSM 15171 DNA gyrase B (gyrB) gene, partial cds
DSM 15171
T
2006/10/28 1146
CP000032 Ruegeria pomeroyi DSS-3 megaplasmid, complete sequence
DSS-3
T
2004/12/17 491611
CP000031 Ruegeria pomeroyi DSS-3, complete genome
DSS-3
T
2004/12/17 4109437
AY457918 Silicibacter pomeroyi putative LysR type transcriptional regulator (pcaQ),putative para-hydroxybenzoate hydroxylase (pobA), putativegamma-carboxymuconolactone decarboxylase (pcaC), putative protocatechuate3,4 dioxygenase beta subunit (pcaH), and putative protocatechuate 3,4dioxygenase alpha subunit (pcaG) genes, complete cds; and conservedhypothetical protein gene, partial cds
DSS-3
T
2003/11/26 4970
AY040252 Silicibacter sp. DSS-3 protocatechuate 3,4-dioxygenase beta subunit (pcaH)gene, partial cds
DSS-3
T
2001/07/03 159
AF098491 Silicibacter pomeroyi strain DSS-3 16S ribosomal RNA gene, partialsequence
DSS-3
T
1999/09/10 1463
15 items found, displaying all items.
publications
10 items found, displaying all items.
Rosenblad MA, Larsen N, Samuelsson T, Zwieb C
RNA Biol 6(5), 508-516, 2009
Yoon JH, Lee SY, Kang SJ, Lee CH, Oh TK
Int J Syst Evol Microbiol 57(3), 542-547, 2007
Moran MA, Belas R, Schell MA, Gonzalez JM, Sun F, Sun S, Binder BJ, Edmonds J, Ye W, Orcutt B, Howard EC, Meile C, Palefsky W, Goesmann A, Ren Q, Paulsen I, Ulrich LE, Thompson LS, Saunders E, Buchan A
Appl Environ Microbiol 73(14), 4559-4569, 2007
Andersen ES, Rosenblad MA, Larsen N, Westergaard JC, Burks J, Wower IK, Wower J, Gorodkin J, Samuelsson T, Zwieb C
Nucleic Acids Res 34(Databaseissue), D163-D168, 2006
Moran MA, Buchan A, Gonzalez JM, Heidelberg JF, Whitman WB, Kiene RP, Henriksen JR, King GM, Belas R, Fuqua C, Brinkac L, Lewis M, Johri S, Weaver B, Pai G, Eisen JA, Rahe E, Sheldon WM, Ye W, Miller TR, Carlton J, Rasko DA, Paulsen IT, Ren Q, Daugherty SC, Deboy RT, Dodson RJ, Durkin AS, Madupu R, Nelson WC, Sullivan SA, Rosovitz MJ, Haft DH, Selengut J, Ward N
Nature 432(7019), 910-913, 2004
Buchan A, Neidle EL, Moran MA
Appl Environ Microbiol 70(3), 1658-1668, 2004
Gonzalez JM, Covert JS, Whitman WB, Henriksen JR, Mayer F, Scharf B, Schmitt R, Buchan A, Fuhrman JA, Kiene RP, Moran MA
Int J Syst Evol Microbiol 53(5), 1261-1269, 2003
Buchan A, Neidle EL, Moran MA
Appl Environ Microbiol 67(12), 5801-5809, 2001
10 items found, displaying all items.