Strain Passport
USDA 110 Bradyrhizobium japonicum

overview

species name

Bradyrhizobium japonicum

all known species names for this strain
*Bradyrhizobium japonicum*
Rhizobium sp.

strain numbers

3I1B110 , ACCC 15034 , BCRC 13528 , CCRC 13528 , CCT 4249 , IAM 13628 , IFO 14792 , JCM 10833 , NBRC 14792 , NIFTAL 102 , NRRL B-4361 , NRRL B-4450 , R-12974 , USDA 110

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history

This Histri was manually curated (last saved on 2009-10-31).

Histri

sequences

2,442 items found, displaying 1 to 25.[First/Prev] 1, 2, 3, 4, 5, 6, 7, 8 [Next/Last]

accession#	description	strainnumber	date	length
HB920624	Sequence 53299 from Patent EP2096177	USDA 110	2009/09/25	1245
HB920626	Sequence 53301 from Patent EP2096177	USDA 110	2009/09/25	1005
HB924276	Sequence 56951 from Patent EP2096177	USDA 110	2009/09/25	405
HB929700	Sequence 62375 from Patent EP2096177	USDA 110	2009/09/25	339
HB959276	Sequence 91951 from Patent EP2096177	USDA 110	2009/09/25	807
HB959280	Sequence 91955 from Patent EP2096177	USDA 110	2009/09/25	738
HB963170	Sequence 95845 from Patent EP2096177	USDA 110	2009/09/25	981
HB922233	Sequence 54908 from Patent EP2096177	USDA 110	2009/09/25	1146
HB941621	Sequence 74296 from Patent EP2096177	USDA 110	2009/09/25	3153
HB941625	Sequence 74300 from Patent EP2096177	USDA 110	2009/09/25	3126
HB971931	Sequence 104606 from Patent EP2096177	USDA 110	2009/09/25	894
HB971929	Sequence 104604 from Patent EP2096177	USDA 110	2009/09/25	891
HB971927	Sequence 104602 from Patent EP2096177	USDA 110	2009/09/25	861
HB973717	Sequence 106392 from Patent EP2096177	USDA 110	2009/09/25	597
HB964596	Sequence 97271 from Patent EP2096177	USDA 110	2009/09/25	1038
HB963174	Sequence 95849 from Patent EP2096177	USDA 110	2009/09/25	993
HB942185	Sequence 74860 from Patent EP2096177	USDA 110	2009/09/25	1368
HB941623	Sequence 74298 from Patent EP2096177	USDA 110	2009/09/25	3189
HB922235	Sequence 54910 from Patent EP2096177	USDA 110	2009/09/25	1188
HB963172	Sequence 95847 from Patent EP2096177	USDA 110	2009/09/25	1023
HB963168	Sequence 95843 from Patent EP2096177	USDA 110	2009/09/25	1029
HB959278	Sequence 91953 from Patent EP2096177	USDA 110	2009/09/25	810
HB952916	Sequence 85591 from Patent EP2096177	USDA 110	2009/09/25	1278
HB946484	Sequence 79159 from Patent EP2096177	USDA 110	2009/09/25	339
HB941619	Sequence 74294 from Patent EP2096177	USDA 110	2009/09/25	3144

2,442 items found, displaying 1 to 25.[First/Prev] 1, 2, 3, 4, 5, 6, 7, 8 [Next/Last]

publications

44 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]


Small SK, Puri S, Sangwan I, O'Brian MR Positive control of ferric siderophore receptor gene expression by the Irr protein in Bradyrhizobium japonicum J Bacteriol 191(5), 1361-1368, 2009
Yokoyama T Flavonoid-responsive nodY-lacZ expression in three phylogenetically different Bradyrhizobium groups Can J Microbiol 54(5), 401-410, 2008
Krol JE, Mazur A, Marczak M, Skorupska A Syntenic arrangements of the surface polysaccharide biosynthesis genes in Rhizobium leguminosarum Genomics 89(2), 237-247, 2007
Saeki Y, Aimi N, Hashimoto M, Tsukamoto S, Kaneko A, Yoshida N, Nagatomo Y, Akao S Grouping of Bradyrhizobium USDA strains by Sequence Analysis of 16S rDNA and 16S-23S rDNA Internal Transcribed Spacer Region Soil Sci Plant Nutr 50, 517-525, 2004
Wiedemann G, Muller P Use of Tn KPK2 for sequencing a 10.6-kb PstI DNA fragment of Bradyrhizobium japonicum and for the construction of aspA and ndvA mutants Arch Microbiol 181(6), 418-427, 2004
Green LS, Waters JK, Ko S, Emerich DW Comparative analysis of the Bradyrhizobium japonicum sucA region Can J Microbiol 49(4), 237-243, 2003
Sameshima R, Isawa T, Sadowsky MJ, Hamada T, Kasai H, Shutsrirung A, Mitsui H, Minamisawa K Phylogeny and distribution of extra-slow-growing Bradyrhizobium japonicum harboring high copy numbers of RSalpha, RSbeta and IS1631 FEMS Microbiol Ecol 44(2), 191-202, 2003
Mesa S, Velasco L, Manzanera ME, Delgado MJ, Bedmar EJ Characterization of the norCBQD genes, encoding nitric oxide reductase, in the nitrogen fixing bacterium Bradyrhizobium japonicum Microbiology 148(11), 3553-3560, 2002
Kaneko T, Nakamura Y, Sato S, Minamisawa K, Uchiumi T, Sasamoto S, Watanabe A, Idesawa K, Iriguchi M, Kawashima K, Kohara M, Matsumoto M, Shimpo S, Tsuruoka H, Wada T, Yamada M, Tabata S Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110 (supplement) DNA Res 9(6), 225-256, 2002
Kaneko T, Nakamura Y, Sato S, Minamisawa K, Uchiumi T, Sasamoto S, Watanabe A, Idesawa K, Iriguchi M, Kawashima K, Kohara M, Matsumoto M, Shimpo S, Tsuruoka H, Wada T, Yamada M, Tabata S Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110 DNA Res 9(6), 189-197, 2002
Velasco L, Mesa S, Delgado MJ, Bedmar EJ Characterization of the nirK gene encoding the respiratory, Cu-containing nitrite reductase of Bradyrhizobium japonicum Biochim Biophys Acta 1521(1-3), 130-134, 2001
Fischer HM, Velasco L, Delgado MJ, Bedmar EJ, Scharen S, Zingg D, Gottfert M, Hennecke H One of two hemN genes in Bradyrhizobium japonicum is functional during anaerobic growth and in symbiosis J Bacteriol 183(4), 1300-1311, 2001
Louch HA, Miller KJ Synthesis of a low-molecular-weight form of exopolysaccharide by Bradyrhizobium japonicum USDA 110 Appl Environ Microbiol 67(2), 1011-1014, 2001
Sy A, Giraud E, Jourand P, Garcia N, Willems A, de Lajudie P, Prin Y, Neyra M, Gillis M, Boivin-Masson C, Dreyfus B Methylotrophic Methylobacterium bacteria nodulate and fix nitrogen in symbiosis with legumes J Bacteriol 183(1), 214-220, 2001
Koo HM, Kim YS Identification of active-site residues in Bradyrhizobium japonicum malonyl-coenzyme A synthetase Arch Biochem Biophys 378(1), 167-174, 2000
Westenberg DJ, Guerinot ML Succinate dehydrogenase (Sdh) from Bradyrhizobium japonicum is closely related to mitochondrial Sdh J Bacteriol 181(15), 4676-4679, 1999
Lorite MJ, Sanjuan J, Velasco L, Olivares J, Bedmar EJ Characterization of Bradyrhizobium japonicum pcaBDC genes involved in 4-hydroxybenzoate degradation Biochim Biophys Acta 1397(3), 257-261, 1998
Becker BU, Kosch K, Parniske M, Muller P Exopolysaccharide (EPS) synthesis in Bradyrhizobium japonicum: sequence, operon structure and mutational analysis of an exo gene cluster Mol Gen Genet 259(2), 161-171, 1998
Bairl A, Muller P A second gene for type I signal peptidase in Bradyrhizobium japonicum, sipF, is located near genes involved in RNA processing and cell division Mol Gen Genet 260(4), 346-356, 1998
Tully RE, van Berkum P, Lovins KW, Keister DL Identification and sequencing of a cytochrome P450 gene cluster from Bradyrhizobium japonicum Biochim Biophys Acta 1398(3), 243-255, 1998
Luka S, Stacey G Molecular studies on a new genetic locus linked to the common nodulation genes in Bradyrhizobium japonicum FEMS Microbiol Lett 148(2), 145-151, 1997
Kuykendall LD, Hunter WJ The sequence of a symbiotically essential Bradyrhizobium japonicum operon consisting of trpD, trpC and a moaC-like gene Biochim Biophys Acta 1350(3), 277-281, 1997
Green LS, Emerich DW Bradyrhizobium japonicum does not require alpha-ketoglutarate dehydrogenase for growth on succinate or malate J Bacteriol 179(1), 194-201, 1997
Bhagwat AA, Gross KC, Tully RE, Keister DL Beta-glucan synthesis in Bradyrhizobium japonicum: characterization of a new locus (ndvC) influencing beta-(1-->6) linkages J Bacteriol 178(15), 4635-4642, 1996
Muller P, Ahrens K, Keller T, Klaucke A A TnphoA insertion within the Bradyrhizobium japonicum sipS gene, homologous to prokaryotic signal peptidases, results in extensive changes in the expression of PBM-specific nodulins of infected soybean (Glycine max) cells Mol Microbiol 18(5), 831-840, 1995

44 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

Strain PassportUSDA 110 Bradyrhizobium japonicum

Strain Passport
USDA 110 Bradyrhizobium japonicum