Strain Passport
DSMZ 5975 Azorhizobium caulinodans

overview

species name

all known species names for this strain
*Azorhizobium caulinodans*

type strain of

Azorhizobium caulinodans

strain numbers

ATCC 43989

BCRC 15787

BCRC 15789

CCRC 15787

CCRC 15789

CCT 4183

CCUG 26647

CECT 4398

CIP 107330

DSM 5975

DSMZ 5975

IAM 13624

ICMP 13637

IFO 14845

JCM 20966

KACC 10643

LMG 6465

LMG 8557

NBRC 14845

NCIMB 13405

ORS 571

USDA 4892

availability map

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history

This Histri was manually curated (last saved on 2008-08-21).

Histri

sequences

44 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

accession#	description	strainnumber	date	length
HQ143398	Azorhizobium caulinodans strain USDA4892 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	USDA 4892 T USDA 4892 is type strain of: Azorhizobium caulinodans	2011/10/04	938
FJ612449	Azorhizobium caulinodans ORS 571 AsiE (asiE) gene, complete cds	ORS 571 T ORS 571 is type strain of: Azorhizobium caulinodans	2009/02/03	606
FJ378904	Azorhizobium caulinodans ORS 571 hyq operon, complete sequence	ORS 571 T ORS 571 is type strain of: Azorhizobium caulinodans	2008/11/11	8152
AP009384	Azorhizobium caulinodans ORS 571 DNA, complete genome	ORS 571 T ORS 571 is type strain of: Azorhizobium caulinodans	2007/10/17	5369772
AB303393	Azorhizobium caulinodans genes for putative response regulator receiver, nitrogenase iron protein, putative nitrogen fixation protein, complete cds	ORS 571 T ORS 571 is type strain of: Azorhizobium caulinodans	2007/08/28	2888
AB303392	Azorhizobium caulinodans genes for Fe-S metabolism associated SufE protein, nitrogenase iron protein, nitrogenase molybdenum-iron protein alpha chain, complete and partial cds	ORS 571 T ORS 571 is type strain of: Azorhizobium caulinodans	2007/08/28	2888
AJ563960	Azorhizobium caulinodans partial nifH gene for nitrogenase iron protein,strain DSM 5975	DSM 5975 T DSM 5975 is type strain of: Azorhizobium caulinodans	2004/05/17	439
AY581127	Azorhizobium caulinodans strain ORS571 hydrogenase gene cluster, completesequence	ORS 571 T ORS 571 is type strain of: Azorhizobium caulinodans	2004/04/20	21000
AJ431131	Azorhizobium caulinodans partial dnaK gene for molecular chaperone, strainORS571	ORS 571 T ORS 571 is type strain of: Azorhizobium caulinodans	2003/11/10	278
AY244367	Azorhizobium caulinodans strain USDA 4892 23S ribosomal RNA gene, partialsequence	USDA 4892 T USDA 4892 is type strain of: Azorhizobium caulinodans	2003/04/11	2788
AF345253	Azorhizobium caulinodans strain LMG 6465 16S ribosomal RNA gene, partialsequence; internal transcribed spacer, complete sequence; and 23S ribosomalRNA, partial sequence	LMG 6465 T LMG 6465 is type strain of: Azorhizobium caulinodans	2003/01/04	852
AF466759	Azorhizobium caulinodans strain UPM1143 hydrogenase large subunit (hupL)gene, partial cds	ORS 571 T ORS 571 is type strain of: Azorhizobium caulinodans	2002/05/03	453
AF466160	Azorhizobium caulinodans strain UPM1143 hydrogenase small subunit (hupS)gene, partial cds	ORS 571 T ORS 571 is type strain of: Azorhizobium caulinodans	2002/05/03	537
AF268608	Azorhizobium caulinodans clone II tRNA-Pro gene, complete sequence	ORS 571 T ORS 571 is type strain of: Azorhizobium caulinodans	2001/12/20	172
AF268607	Azorhizobium caulinodans clone I tRNA-Pro gene, complete sequence	ORS 571 T ORS 571 is type strain of: Azorhizobium caulinodans	2001/12/20	167
AF304307	Azorhizobium caulinodans methanol dehydrogenase large subunit-like protein(mxaF') gene, partial cds	ORS 571 T ORS 571 is type strain of: Azorhizobium caulinodans	2000/12/03	426
AJ294389	Azorhizobium caulinodans partial atpD gene for ATP synthase beta subunit,strain USDA 4892	USDA 4892 T USDA 4892 is type strain of: Azorhizobium caulinodans	2000/08/23	458
AJ294363	Azorhizobium caulinodans partial recA gene, strain USDA 4892	USDA 4892 T USDA 4892 is type strain of: Azorhizobium caulinodans	2000/08/23	441
AJ006238	Azorhizobium caulinodans nac gene	ORS 571 T ORS 571 is type strain of: Azorhizobium caulinodans	1998/05/22	936
AJ006237	Azorhizobium caulinodans phbC gene	ORS 571 T ORS 571 is type strain of: Azorhizobium caulinodans	1998/05/22	1752
AJ225126	Azorhizobium caulinodans amtB gene	ORS 571 T ORS 571 is type strain of: Azorhizobium caulinodans	1998/03/19	1482
AJ225125	Azorhizobium caulinodans glnK gene	ORS 571 T ORS 571 is type strain of: Azorhizobium caulinodans	1998/03/19	339
Y10213	A.caulinodans glnB & glnA genes	ORS 571 T ORS 571 is type strain of: Azorhizobium caulinodans	1997/01/07	2094
X94200	A.caulinodans 16S ribosomal RNA	ORS 571 T ORS 571 is type strain of: Azorhizobium caulinodans	1996/05/10	1410
D13948	Azorhizobium caulinodans 16S rRNA gene	ORS 571 T ORS 571 is type strain of: Azorhizobium caulinodans	1995/06/22	1436

44 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

publications

47 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]


Liu CT, Lee KB, Wang YS, Peng MH, Lee KT, Suzuki S, Suzuki T, Oyaizu H Involvement of the azorhizobial chromosome partition gene (parA) in the onset of bacteroid differentiation during Sesbania rostrata stem nodule development Appl Environ Microbiol 77(13), 4371-4382, 2011
Akiba N, Aono T, Toyazaki H, Sato S, Oyaizu H phrR-like gene praR of Azorhizobium caulinodans ORS571 is essential for symbiosis with Sesbania rostrata and is involved in expression of reb genes Appl Environ Microbiol 76(11), 3475-3485, 2010
Ng G, Tom CG, Park AS, Zenad L, Ludwig RA A novel endo-hydrogenase activity recycles hydrogen produced by nitrogen fixation PLoS One 4(3), e4695, 2009
Tsukada S, Aono T, Akiba N, Lee KB, Liu CT, Toyazaki H, Oyaizu H Comparative genome-wide transcriptional profiling of Azorhizobium caulinodans ORS571 grown under free-living and symbiotic conditions Appl Environ Microbiol 75(15), 5037-5046, 2009
Lee KB, De Backer P, Aono T, Liu CT, Suzuki S, Suzuki T, Kaneko T, Yamada M, Tabata S, Kupfer DM, Najar FZ, Wiley GB, Roe B, Binnewies TT, Ussery DW, D'Haeze W, Herder JD, Gevers D, Vereecke D, Holsters M, Oyaizu H The genome of the versatile nitrogen fixer Azorhizobium caulinodans ORS571 BMC Genomics 9, 271, 2008
Iki T, Aono T, Oyaizu H Evidence for functional differentiation of duplicated nifH genes in Azorhizobium caulinodans FEMS Microbiol Lett 274(2), 173-179, 2007
Suzuki S, Aono T, Lee KB, Suzuki T, Liu CT, Miwa H, Wakao S, Iki T, Oyaizu H Rhizobial factors required for stem nodule maturation and maintenance in Sesbania rostrata-Azorhizobium caulinodans ORS571 symbiosis Appl Environ Microbiol 73(20), 6650-6659, 2007
Kwon SW, Park JY, Kim JS, Kang JW, Cho YH, Lim CK, Parker MA, Lee GB Phylogenetic analysis of the genera Bradyrhizobium, Mesorhizobium, Rhizobium and Sinorhizobium on the basis of 16S rRNA gene and internally transcribed spacer region sequences Int J Syst Evol Microbiol 55(1), 263-270, 2005
Baginsky C, Palacios JM, Imperial J, Ruiz-Argueso T, Brito B Molecular and functional characterization of the Azorhizobium caulinodans ORS571 hydrogenase gene cluster FEMS Microbiol Lett 237(2), 399-405, 2004
Dedysh SN, Ricke P, Liesack W NifH and NifD phylogenies: an evolutionary basis for understanding nitrogen fixation capabilities of methanotrophic bacteria Microbiology 150(5), 1301-1313, 2004
Stepkowski T, Czaplinska M, Miedzinska K, Moulin L The variable part of the dnaK gene as an alternative marker for phylogenetic studies of rhizobia and related alpha Proteobacteria Syst Appl Microbiol 26(4), 483-494, 2003
van Berkum P, Terefework Z, Paulin L, Suomalainen S, Lindstrom K, Eardly BD Discordant phylogenies within the rrn loci of Rhizobia J Bacteriol 185(10), 2988-2998, 2003
Sawada H, Kuykendall LD, Young JM Changing concepts in the systematics of bacterial nitrogen-fixing legume symbionts J Gen Appl Microbiol 49(3), 155-179, 2003
Semsey S, Blaha B, Koles K, Orosz L, Papp PP Site-specific integrative elements of rhizobiophage 16-3 can integrate into proline tRNA (CGG) genes in different bacterial genera J Bacteriol 184(1), 177-182, 2002
Baginsky C, Brito B, Imperial J, Palacios JM, Ruiz-Argueso T Diversity and evolution of hydrogenase systems in rhizobia Appl Environ Microbiol 68(10), 4915-4924, 2002
Gaunt MW, Turner SL, Rigottier-Gois L, Lloyd-Macgilp SA, Young JP Phylogenies of atpD and recA support the small subunit rRNA-based classification of rhizobia Int J Syst Evol Microbiol 51(6), 2037-2048, 2001
Sy A, Giraud E, Jourand P, Garcia N, Willems A, de Lajudie P, Prin Y, Neyra M, Gillis M, Boivin-Masson C, Dreyfus B Methylotrophic Methylobacterium bacteria nodulate and fix nitrogen in symbiosis with legumes J Bacteriol 183(1), 214-220, 2001
Young JM, Kuykendall LD, Martinez-Romero E, Kerr A, Sawada H A revision of Rhizobium Frank 1889, with an emended description of the genus, and the inclusion of all species of Agrobacterium Conn 1942 and Allorhizobium undicola de Lajudie et al. 1998 as new combinations: Rhizobium radiobacter, R. rhizogenes, R. rubi, R. undicola and R. vitis Int J Syst Evol Microbiol 51(1), 89-103, 2001
Michel-Reydellet N, Desnoues N, de Zamaroczy M, Elmerich C, Kaminski PA Characterisation of the glnK-amtB operon and the involvement of AmtB in methylammonium uptake in Azorhizobium caulinodans Mol Gen Genet 258(6), 671-677, 1998
Mandon K, Michel-Reydellet N, Encarnacion S, Kaminski PA, Leija A, Cevallos MA, Elmerich C, Mora J Poly-beta-hydroxybutyrate turnover in Azorhizobium caulinodans is required for growth and affects nifA expression J Bacteriol 180(19), 5070-5076, 1998
Michel-Reydellet N, Desnoues N, Elmerich C, Kaminski PA Characterization of Azorhizobium caulinodans glnB and glnA genes: involvement of the P(II) protein in symbiotic nitrogen fixation J Bacteriol 179(11), 3580-3587, 1997
Mergaert P, D'Haeze W, Fernandez-Lopez M, Geelen D, Goethals K, Prome JC, Van Montagu M, Holsters M Fucosylation and arabinosylation of Nod factors in Azorhizobium caulinodans: involvement of nolK, nodZ as well as noeC and/or downstream genes Mol Microbiol 21(2), 409-419, 1996
Rainey FA, Wiegel J 16S ribosomal DNA sequence analysis confirms the close relationship between the genera Xanthobacter, Azorhizobium, and Aquabacter and reveals a lack of phylogenetic coherence among Xanthobacter species Int J Syst Bacteriol 46, 607-610, 1996
Geelen D, Goethals K, Van Montagu M, Holsters M The nodD locus from Azorhizobium caulinodans is flanked by two repetitive elements Gene 164(1), 107-111, 1995
Goethals K, Leyman B, Van Den Eede G, Van Montagu M, Holsters M An Azorhizobium caulinodans ORS571 locus involved in lipopolysaccharide production and nodule formation on Sesbania rostrata stems and roots J Bacteriol 176(1), 92-99, 1994

47 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]

Strain PassportDSMZ 5975 Azorhizobium caulinodans

Strain Passport
DSMZ 5975 Azorhizobium caulinodans