Strain Passport
TR 3 Rhizobium rubi

overview
species name
all known species names for this strain
Rhizobium rubi
Agrobacterium rubi
Agrobacterium rhizogenes
type strain of Agrobacterium rubi, Rhizobium rubi
16S Sequence AM181759 (LTP: AY626395)
strain numbers
"Hildebrand ""boysenberry 1"""
T
,
?Hildebrand "black raspberry 1"
T
,
?Hildebrand "boysenberry 1"
T
,
?Hildebrand boysenberry 1
T
,
ATCC 13335
T
,
BCRC 12820
T
,
CCRC 12820
T
,
CECT 4118
T
,
CFBP 1317
T
,
CFBP 5509
T
,
CFBP 6448
T
,
CGMCC 1.2558
T
,
CIP 104332
T
,
DSM 6772
T
,
DSMZ 6772
T
,
HAMBI 1812
T
,
Hildebrand "boysenberry 1"
T
,
Hildebrand boysenberry 1
T
,
IAM 13569
T
,
ICMP 11833
T
,
ICMP 6428
T
,
ICPB TR3
T
,
IFO 13261
T
,
JCM 20918
T
,
KACC 10739
T
,
KCTC 12454
T
,
KCTC 2434
T
,
Keane 44
T
,
LMG 156
T
,
LMG 17935
T
,
NBRC 13261
T
,
NCPPB 1854
T
,
NZRCC 10203
T
,
PDDCC 6428
T
,
Starr TR 3
T
,
TR 3
T
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This Histri was built automatically but not manually verified. As a consequence, the Histri can be incomplete or can contain errors.
sequences
36 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]
accession# description strainnumber date length
KF206905 Agrobacterium rubi strain HAMBI 1812 RNA polymerase beta subunit (rpoB) gene, partial cds
HAMBI 1812
T
2014/05/12 585
KF206814 Agrobacterium rubi strain HAMBI 1812 recombinase A (recA) gene, partial cds
HAMBI 1812
T
2014/05/12 462
KF206562 Agrobacterium rubi strain HAMBI 1812 ATP synthase F1 beta subunit (atpD) gene, partial cds
HAMBI 1812
T
2014/05/12 496
JX064338 Agrobacterium rubi ThrA (thrA) gene, partial cds
IAM 13569
T
2012/12/05 746
JX064266 Agrobacterium rubi TruA (truA) gene, partial cds
IAM 13569
T
2012/12/05 416
JX064194 Agrobacterium rubi hypothetical protein (SMc00019) gene, partial cds
IAM 13569
T
2012/12/05 368
AB680385 Agrobacterium rubi gene for 16S rRNA, partial sequence, strain: NBRC 13261
NBRC 13261
T
2011/12/11 1410
FR851470 Agrobacterium rubi partial telA gene for protelomerase, strain TR3, allele telA-Aru-1
CFBP 5509
T
2011/07/08 918
HQ438205 Agrobacterium rubi strain LMG156 DNA gyrase subunit B (gyrB) gene, partial cds
LMG 156
T
2011/04/04 1076
HM238712 Agrobacterium sp. LMG17935 RNA polymerase beta subunit (rpoB) gene, partial cds
LMG 17935
T
2010/06/11 534
FM213293 Agrobacterium rubi partial hrcA gene for heat-inducible transcription repressor, type strain LMG 17935T
LMG 17935
T
2009/07/05 624
FM213245 Agrobacterium rubi partial ribonuclease P RNA (rnpB gene), type strain LMG 17935T
LMG 17935
T
2009/07/05 299
FM213197 Agrobacterium rubi partial pal gene for peptidoglycan-associated lipoprotein, type strain LMG 17935T
LMG 17935
T
2009/07/05 261
FM213147 Agrobacterium rubi partial rpoD gene for RNA polymerase sigma factor, type strain LMG 17935T
LMG 17935
T
2009/07/05 606
EU812069 Agrobacterium rubi strain LMG 17935 FusA (fusA) gene, partial cds
LMG 17935
T
2008/08/24 751
AM418834 Agrobacterium rubi partial gyrB gene for DNA gyrase subunit beta, strain LMG 17935
LMG 17935
T
2007/05/01 672
AM418787 Agrobacterium rubi partial atpD gene for ATP synthase beta subunit, strain LMG 17935
LMG 17935
T
2007/05/01 474
AM295444 Agrobacterium rubi partial pnp gene for polyribonucleotide nucleotidyltransferase, strain LMG 17935
LMG 17935
T
2007/03/21 540
AM295440 Agrobacterium rubi partial gap gene for glyceraldehyde 3-phosphate dehydrogenase, strain LMG 17935
LMG 17935
T
2007/03/21 801
AM295394 Agrobacterium rubi partial rpoB gene for RNA polymerase beta subunit, strain LMG 17935
LMG 17935
T
2007/03/21 954
EF217310 Agrobacterium rubi strain LMG 17935 RNA polymerase beta chain (rpoB) gene, partial cds
LMG 17935
T
2007/02/14 714
AM182936 Agrobacterium rubi partial glnA gene for glutamine synthase, strain LMG 17935
LMG 17935
T
2006/07/01 977
AM182122 Agrobacterium rubi partial recA gene for recombinase A, strain LMG 17935
LMG 17935
T
2006/07/01 499
AM182078 Agrobacterium rubi partial dnaK gene for molecular chaperone Hsp70, stain LMG 17935
LMG 17935
T
2006/07/01 286
AM181759 Agrobacterium rubi partial 16S rRNA gene, strain LMG 17935
LMG 17935
T
2006/07/01 1426
36 items found, displaying 1 to 25.[First/Prev] 1, 2 [Next/Last]
publications
24 items found, displaying all items.
Mousavi SA, Osterman J, Wahlberg N, Nesme X, Lavire C, Vial L, Paulin L, de Lajudie P, Lindstrom K
Syst Appl Microbiol 37(3), 208-215, 2014
Zhang YM, Tian CF, Sui XH, Chen WF, Chen WX
PLoS One 7(9), e44936, 2012
Aujoulat F, Jumas-Bilak E, Masnou A, Salle F, Faure D, Segonds C, Marchandin H, Teyssier C
J Bacteriol 193(10), 2608-2618, 2011
Martens M, Dawyndt P, Coopman R, Gillis M, De Vos P, Willems A
Int J Syst Evol Microbiol 58(1), 200-214, 2008
Martens M, Delaere M, Coopman R, De Vos P, Gillis M, Willems A
Int J Syst Evol Microbiol 57(3), 489-503, 2007
Eardly BD, Nour SM, van Berkum P, Selander RK
Appl Environ Microbiol 71(3), 1328-1335, 2005
Kwon SW, Park JY, Kim JS, Kang JW, Cho YH, Lim CK, Parker MA, Lee GB
Int J Syst Evol Microbiol 55(1), 263-270, 2005
Young JM, Park DC, Weir BS
FEMS Microbiol Lett 238(1), 125-131, 2004
van Berkum P, Terefework Z, Paulin L, Suomalainen S, Lindstrom K, Eardly BD
J Bacteriol 185(10), 2988-2998, 2003
Sawada H, Kuykendall LD, Young JM
J Gen Appl Microbiol 49(3), 155-179, 2003
Pulawska J, Maes M, Willems A, Sobiczewski P
Syst Appl Microbiol 23(2), 238-244, 2000
Syst Appl Microbiol 12, 119, 1999
Willems A, Collins MD
Int J Syst Bacteriol 43(2), 305-313, 1993
Int J Syst Bacteriol 30, 225-420, 1980
Int J Syst Bacteriol 30, 246, 1980
Keane, P J, Kerr, A, New, P B
Aust J Biol Sci 23, 585-595, 1970
Lippincott, J A, Lippincott, B B
J Gen Microbiol 59, 57-75, 1969
Growth of phytopathogenic bacteria in a synthetic asparagin medium Phytopathology 33, 314-318, 1943
24 items found, displaying all items.